Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20260 Brassica napus
A03p50280 Brassica napus
A06p15030 Brassica napus
Aa31LG2G13130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis
Actinidia02195 Actinidia chinensis
Actinidia25909 Actinidia chinensis
Ah.12g053980 Amaranthus hybridus
AL7G37660 Arabidopsis lyrata
Aqoxy5G02622 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea
AT4G17050 Arabidopsis thaliana
ATR0665G013 Amborella trichopoda
Atru.chr9.1206 Acer truncatum
AUR62007167 Chenopodium quinoa
AUR62018839 Chenopodium quinoa
BcaC01g03436 Brassica carinata
BcaC06g33538 Brassica carinata
BcaC09g50439 Brassica carinata
BcaNung00130 Brassica carinata
BcaNung04656 Brassica carinata
BolC1t02493H Brassica oleracea
BolC7t45360H Brassica oleracea
BraA01t01953Z Brassica rapa
BraA03t14117Z Brassica rapa
C01p25410 Brassica napus
C07p48390 Brassica napus
C07p48460 Brassica napus
C07p48520 Brassica napus
CAN.G572.11 Capsicum annuum
CANSAT21G0710 Cannabis sativa
CARHR223610 Cardamine hirsuta
Carub.0007s2437 Capsella rubella
Ca_22017_v3 Cicer arietinum L.
CBR_g38093 Chara braunii
Cc08_g11330 Coffea canephora
CDE12G0966 Ceratophyllum demersum
Cfa012327 Carpinus fangiana
Ciclev10021365m.g Citrus clementina
CiPaw.11G072300 Carya illinoinensis
ClCG10G005070 Citrullus lanatus
COL.COLO4_07285 Corchorus olitorius
Cpa.g.sc3814.1 Carica papaya
Cpa.g.sc98.35 Carica papaya
Cpa.g.sc98.38 Carica papaya
Cre06.g290000 Chlamydomonas reinhardtii
CsaV3_3G004750 Cucumis sativus L.
CSS0019555 Camellia sinensis var. sinensis
CSS0048254 Camellia sinensis var. sinensis
DCAR_008330 Daucus carota
Dinv28876 Davidia involucrata
Duzib084G0008 Durio zibethinus
ECA234G2169 Erigeron canadensis
EL10Ac5g12270 Beta vulgaris
Eucgr.D02133 Eucalyptus grandis
FAN04G1813 Fragaria x ananassa
FAN08G0760 Fragaria x ananassa
FAN18G0603 Fragaria x ananassa
FvH4_5g20400 Fragaria vesca
Glyma.05G066500 Glycine max
Glyma.17G148400 Glycine max
Gohir.A12G212700 Gossypium hirsutum
Gohir.D12G215200 Gossypium hirsutum
Gorai.008G230800 Gossypium raimondii
GSVIVG01003685001 Vitis vinifera
GSVIVG01021810001 Vitis vinifera
HanXRQChr17g0534011 Helianthus annuus
Haze_08363 Corylus avellana
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla
HPP92_025744 Vanilla planifolia
Lalb_Chr09g0329771 Lupinus albus
Lj4g0002003 Lotus japonicus
Lj8A277T42 Lonicera japonica
Lsat_1_v5_gn_3_15361 Lactuca sativa
Lsat_1_v5_gn_6_74120 Lactuca sativa
Manes.01G089000 Manihot esculenta
Mapoly0072s0097 Marchantia polymorpha
MBI04_g13858_MAGBIO Magnolia biondii
MCO04G282 Micromonas commoda
MCO07G379 Micromonas commoda
MD04G1055500 Malus domestica
MD06G1047100 Malus domestica
Medtr4g099290 Medicago truncatula
MELO3C000773.2 Cucumis melo
MELO3C014174.2 Cucumis melo
MSTRG.6640 Avicennia marina
Nitab4.5_0000500g0240 Nicotiana tabacum
Nitab4.5_0009451g0030 Nicotiana tabacum
Nn6g33757 Nelumbo nucifera
Oeu012348.1 Olea europaea
Os07g0495000 Oryza sativa ssp. japonica
Peaxi162Scf00301g00519 Petunia axillaris
PGR031G0533 Punica granatum
PGSC0003DMG400026243 Solanum tuberosum
Phvul.003G225600 Phaseolus vulgaris
Potri.001G150800 Populus trichocarpa
Potri.003G083600 Populus trichocarpa
Pp3c9_12580 Physcomitrium patens
Prupe.5G055300 Prunus persica
Psat4g076080 Pisum sativum
PSO675G6476 Papaver somniferum
PSO717G0125 Papaver somniferum
PSO732G0039 Papaver somniferum
PSO732G0290 Papaver somniferum
QL12p008732 Quercus lobata
RcHm_v2.0_Chr7g0205681 Rosa chinensis
Rhsim07G0136400 Rhododendron simsii
Sabra01G0120600 Salix brachista
Sabra01G0120800 Salix brachista
SalBow7G3619 Salvia bowleyana
Sc01g0007980 Simmondsia chinensis
Sed0022790 Sechium edule
SEGI_33649 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39680 Striga asiatica
Solyc08g077840.3 Solanum lycopersicum
Sopen08g026350 Solanum pennellii
Sp7g17140 Schrenkiella parvula
TAR636G1440 Trochodendron aralioides
THA.LOC104807929 Tarenaya hassleriana
Thecc.03G240100 Theobroma cacao
Thhalv10026866m.g Eutrema salsugineum
TPR.G25747 Trifolium pratense
TWI60G0542 Tripterygium wilfordii
unitig_746.g26644 Utricularia gibba
vmacro00832 Vaccinium macrocarpon
VMungo0251G1767 Vigna mungo
Zm00001eb322060 Zea mays

User provided reference genes

Program Settings