Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p05350 Brassica napus
Aa31LG8G13110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis
Actinidia05494 Actinidia chinensis
Actinidia27971 Actinidia chinensis
Ah.01g018230 Amaranthus hybridus
AL3G46990 Arabidopsis lyrata
Aqoxy3G02908 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea
AT2G15270 Arabidopsis thaliana
ATR0618G054 Amborella trichopoda
AUR62010304 Chenopodium quinoa
AUR62039082 Chenopodium quinoa
BcaB03g16271 Brassica carinata
BcaB08g34585 Brassica carinata
BcaC04g22139 Brassica carinata
BcaC06g36046 Brassica carinata
BolC7t41265H Brassica oleracea
BraA07t28328Z Brassica rapa
C07p08530 Brassica napus
CAN.G1231.7 Capsicum annuum
CANSAT25G0333 Cannabis sativa
CANSAT25G3711 Cannabis sativa
CARHR105640 Cardamine hirsuta
Carub.0003s2910 Capsella rubella
Ca_11076_v3 Cicer arietinum L.
CBR_g44544 Chara braunii
CDE02G2507 Ceratophyllum demersum
CDE02G4185 Ceratophyllum demersum
CDE04G1609 Ceratophyllum demersum
Cfa004575 Carpinus fangiana
Ciclev10006213m.g Citrus clementina
Ciclev10029393m.g Citrus clementina
CiPaw.05G011400 Carya illinoinensis
ClCG05G010280 Citrullus lanatus
COL.COLO4_32597 Corchorus olitorius
Cpa.g.sc76.22 Carica papaya
Cre03.g193150 Chlamydomonas reinhardtii
CsaV3_3G018210 Cucumis sativus L.
CSS0028016 Camellia sinensis var. sinensis
CSS0036049 Camellia sinensis var. sinensis
DCAR_001643 Daucus carota
Dinv15763 Davidia involucrata
Dinv42191 Davidia involucrata
Duzib052G0317 Durio zibethinus
Duzib248G1531 Durio zibethinus
ECA240G2462 Erigeron canadensis
EL10Ac9g22279 Beta vulgaris
Eucgr.E02957 Eucalyptus grandis
FAN15G1894 Fragaria x ananassa
FAN20G0990 Fragaria x ananassa
FvH4_2g05220 Fragaria vesca
Glyma.10G262200 Glycine max
Glyma.20G128800 Glycine max
Gohir.A03G186300 Gossypium hirsutum
Gohir.D02G207100 Gossypium hirsutum
Gorai.005G235000 Gossypium raimondii
HanXRQChr02g0033021 Helianthus annuus
HanXRQChr03g0070291 Helianthus annuus
Haze_10168 Corylus avellana
HPP92_004777 Vanilla planifolia
Hund06318 Selenicereus undatus
Lalb_Chr21g0308351 Lupinus albus
Lj5g0003815 Lotus japonicus
Lj9A321G81 Lonicera japonica
Lsat_1_v5_gn_9_111221 Lactuca sativa
Manes.10G076500 Manihot esculenta
Mapoly0056s0071 Marchantia polymorpha
MBI03_g28533_MAGBIO Magnolia biondii
MBI12_g27878_MAGBIO Magnolia biondii
MCO08G345 Micromonas commoda
MD05G1088900 Malus domestica
MD05G1089500 Malus domestica
Medtr1g107435 Medicago truncatula
MELO3C019546.2 Cucumis melo
Migut.B00388 Erythranthe guttata
MSTRG.16714 Avicennia marina
Nitab4.5_0002815g0010 Nicotiana tabacum
Nitab4.5_0005392g0090 Nicotiana tabacum
Nn1g04703 Nelumbo nucifera
Nn4g25119 Nelumbo nucifera
Oeu017469.1 Olea europaea
Os09g0104300 Oryza sativa ssp. japonica
Peaxi162Scf00016g02334 Petunia axillaris
PGR042G0697 Punica granatum
PGR142G0815 Punica granatum
PGSC0003DMG400025768 Solanum tuberosum
Phvul.007G040000 Phaseolus vulgaris
Potri.001G300300 Populus trichocarpa
Pp3c1_15220 Physcomitrium patens
Pp3c2_21780 Physcomitrium patens
Prupe.8G134800 Prunus persica
Psat6g219120 Pisum sativum
PSO541G1364 Papaver somniferum
PSO675G5876 Papaver somniferum
QL11p033743 Quercus lobata
QL11p033903 Quercus lobata
RcHm_v2.0_Chr6g0255351 Rosa chinensis
Rhsim05G0088300 Rhododendron simsii
Rhsim11G0160200 Rhododendron simsii
Sabra09G0073900 Salix brachista
Sabra16G0188500 Salix brachista
SalBow6G4084 Salvia bowleyana
Sc08g0001390 Simmondsia chinensis
Sed0001717 Sechium edule
Sed0008540 Sechium edule
SEGI_00829 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43080 Striga asiatica
SHI05287 Sapria himalayana
SMO364G0740 Selaginella moellendorffii
Solyc01g107610.4 Solanum lycopersicum
Sopen01g049800 Solanum pennellii
Sp3g28510 Schrenkiella parvula
TAR376G0787 Trochodendron aralioides
TAR628G0594 Trochodendron aralioides
THA.LOC104807242 Tarenaya hassleriana
THA.LOC104819555 Tarenaya hassleriana
Thecc.02G107700 Theobroma cacao
Thecc.04G122800 Theobroma cacao
Thhalv10022867m.g Eutrema salsugineum
TWI32G0763 Tripterygium wilfordii
TWI34G0529 Tripterygium wilfordii
unitig_22.g5723 Utricularia gibba
vmacro02004 Vaccinium macrocarpon
vmacro19450 Vaccinium macrocarpon
VMungo0720G1566 Vigna mungo
Zm00001eb020500 Zea mays
Zm00001eb393310 Zea mays

User provided reference genes

Program Settings