Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis
Actinidia12060 Actinidia chinensis
Actinidia36503 Actinidia chinensis
Ah.03g144510 Amaranthus hybridus
Aqoxy6G01406 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea
ATR0104G015 Amborella trichopoda
Atru.chr3.396 Acer truncatum
AUR62001952 Chenopodium quinoa
AUR62003855 Chenopodium quinoa
AUR62013383 Chenopodium quinoa
AUR62039591 Chenopodium quinoa
CAN.G11.1 Capsicum annuum
CANSAT01G0270 Cannabis sativa
Ca_06605_v3 Cicer arietinum L.
Ca_06861_v3 Cicer arietinum L.
Ca_22186_v3 Cicer arietinum L.
Ca_24781_v3 Cicer arietinum L.
CBR_g31222 Chara braunii
Cc07_g05860 Coffea canephora
CDE03G0440 Ceratophyllum demersum
Cfa003998 Carpinus fangiana
Ciclev10024721m.g Citrus clementina
CiPaw.01G021400 Carya illinoinensis
ClCG01G016710 Citrullus lanatus
COL.COLO4_22183 Corchorus olitorius
Cpa.g.sc55.178 Carica papaya
Cpa.g.sc55.182 Carica papaya
CsaV3_6G043130 Cucumis sativus L.
CSS0009151 Camellia sinensis var. sinensis
CSS0011451 Camellia sinensis var. sinensis
CSS0044544 Camellia sinensis var. sinensis
DCAR_025720 Daucus carota
Dinv29969 Davidia involucrata
Dinv39873 Davidia involucrata
Duzib147G1467 Durio zibethinus
ECA232G0891 Erigeron canadensis
EL10Ac6g15152 Beta vulgaris
Eucgr.H01999 Eucalyptus grandis
FAN19G3143 Fragaria x ananassa
FAN23G0857 Fragaria x ananassa
FAN26G0177 Fragaria x ananassa
FAN28G0789 Fragaria x ananassa
FvH4_1g15710 Fragaria vesca
Glyma.01G184700 Glycine max
Glyma.11G057500 Glycine max
Gohir.A11G046100 Gossypium hirsutum
Gohir.D11G049700 Gossypium hirsutum
Gorai.007G053500 Gossypium raimondii
GSVIVG01002633001 Vitis vinifera
GSVIVG01002722001 Vitis vinifera
HanXRQChr14g0430551 Helianthus annuus
Haze_15426 Corylus avellana
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla
HPP92_004081 Vanilla planifolia
HPP92_004109 Vanilla planifolia
Hund13563 Selenicereus undatus
Lalb_Chr09g0333701 Lupinus albus
Lalb_Chr16g0388301 Lupinus albus
Lj2g0024358 Lotus japonicus
Lj4A140T30 Lonicera japonica
Lj4C140T7 Lonicera japonica
Lsat_1_v5_gn_4_167780 Lactuca sativa
Manes.12G100500 Manihot esculenta
Mapoly0063s0034 Marchantia polymorpha
Mapoly0063s0038 Marchantia polymorpha
MBI06_g08189_MAGBIO Magnolia biondii
MCO09G582 Micromonas commoda
MD02G1169100 Malus domestica
MD15G1281500 Malus domestica
Medtr8g079870 Medicago truncatula
MELO3C007550.2 Cucumis melo
Migut.H00451 Erythranthe guttata
MSTRG.23764 Avicennia marina
MSTRG.2895 Avicennia marina
Nitab4.5_0000382g0030 Nicotiana tabacum
Nitab4.5_0001684g0030 Nicotiana tabacum
Nn1g05861 Nelumbo nucifera
Nn5g30196 Nelumbo nucifera
Oeu003786.1 Olea europaea
Oeu004869.1 Olea europaea
Oeu049306.1 Olea europaea
Os03g0186500 Oryza sativa ssp. japonica
Peaxi162Scf00183g00711 Petunia axillaris
PGR102G0121 Punica granatum
PGSC0003DMG400019754 Solanum tuberosum
Phvul.002G020300 Phaseolus vulgaris
Potri.005G136600 Populus trichocarpa
Potri.007G041300 Populus trichocarpa
Pp3c26_5160 Physcomitrium patens
Pp3c4_25960 Physcomitrium patens
Prupe.7G136200 Prunus persica
Psat0s3889g0080 Pisum sativum
Psat4g089200 Pisum sativum
PSO541G4136 Papaver somniferum
PSO675G0817 Papaver somniferum
QL06p042250 Quercus lobata
RcHm_v2.0_Chr2g0105021 Rosa chinensis
Rhsim10G0119800 Rhododendron simsii
Sabra05G0109100 Salix brachista
Sabra05G0109200 Salix brachista
Sabra07G0036900 Salix brachista
Sc03g0001430 Simmondsia chinensis
Sc11g0005350 Simmondsia chinensis
Sed0018548 Sechium edule
SEGI_01818 Sequoiadendron giganteum
SEGI_14166 Sequoiadendron giganteum
SEGI_17223 Sequoiadendron giganteum
SGA_v2.0_scaffold204G41590 Striga asiatica
SMO301G0037 Selaginella moellendorffii
Solyc03g044620.4 Solanum lycopersicum
Sopen03g008900 Solanum pennellii
TAR381G0606 Trochodendron aralioides
TAR381G1042 Trochodendron aralioides
THA.LOC104804508 Tarenaya hassleriana
THA.LOC104826201 Tarenaya hassleriana
Thecc.01G052700 Theobroma cacao
TPR.G19009 Trifolium pratense
TPR.G31101 Trifolium pratense
TPR.G640 Trifolium pratense
TWI09G0039 Tripterygium wilfordii
unitig_736.g22372 Utricularia gibba
unitig_736.g22373 Utricularia gibba
unitig_736.g22374 Utricularia gibba
vmacro05326 Vaccinium macrocarpon
VMungo1215G0092 Vigna mungo
Zm00001eb006470 Zea mays

User provided reference genes

Program Settings