Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26930 Brassica napus
Aa31LG9G15490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis
Ah.09g233490 Amaranthus hybridus
AL4G31550 Arabidopsis lyrata
Aqoxy2G03876 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea
AT2G35500 Arabidopsis thaliana
ATR0829G218 Amborella trichopoda
Atru.chr6.1520 Acer truncatum
AUR62002644 Chenopodium quinoa
AUR62002645 Chenopodium quinoa
AUR62040998 Chenopodium quinoa
AUR62040999 Chenopodium quinoa
BcaB06g28845 Brassica carinata
BcaC02g07708 Brassica carinata
BcaC02g07709 Brassica carinata
BcaC09g50780 Brassica carinata
BolC1t02019H Brassica oleracea
BolC2t10179H Brassica oleracea
BolC2t11174H Brassica oleracea
BolC3t20061H Brassica oleracea
BolC4t27919H Brassica oleracea
BraA04t18192Z Brassica rapa
C01p20920 Brassica napus
C02p41610 Brassica napus
C03p78000 Brassica napus
C04p64320 Brassica napus
CAN.G726.20 Capsicum annuum
CANSAT21G0548 Cannabis sativa
CANSAT21G0809 Cannabis sativa
CARHR129650 Cardamine hirsuta
Carub.0004s1719 Capsella rubella
Ca_25185_v3 Cicer arietinum L.
CBR_g18978 Chara braunii
Cc08_g03270 Coffea canephora
CDE06G2536 Ceratophyllum demersum
Ciclev10001458m.g Citrus clementina
CiPaw.11G098100 Carya illinoinensis
ClCG10G001310 Citrullus lanatus
COL.COLO4_16947 Corchorus olitorius
Cre16.g659850 Chlamydomonas reinhardtii
CsaV3_3G001380 Cucumis sativus L.
CSS0021967 Camellia sinensis var. sinensis
CSS0050317 Camellia sinensis var. sinensis
DCAR_008226 Daucus carota
Dinv25255 Davidia involucrata
Duzib068G1414 Durio zibethinus
ECA233G6209 Erigeron canadensis
EL10Ac2g03238 Beta vulgaris
Eucgr.E00231 Eucalyptus grandis
Eucgr.E00233 Eucalyptus grandis
FAN04G0555 Fragaria x ananassa
FAN08G1929 Fragaria x ananassa
FAN13G2862 Fragaria x ananassa
FAN18G2637 Fragaria x ananassa
FAN18G2668 Fragaria x ananassa
FAN20G1935 Fragaria x ananassa
FAN24G0436 Fragaria x ananassa
FvH4_2g06760 Fragaria vesca
FvH4_5g23010 Fragaria vesca
Glyma.01G014900 Glycine max
Glyma.07G152633 Glycine max
Gohir.A12G206400 Gossypium hirsutum
Gohir.D12G208800 Gossypium hirsutum
Gorai.008G224300 Gossypium raimondii
GSVIVG01013108001 Vitis vinifera
HanXRQChr04g0098961 Helianthus annuus
Haze_08142 Corylus avellana
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla
HPP92_014848 Vanilla planifolia
Hund09821 Selenicereus undatus
Hund09822 Selenicereus undatus
Lalb_Chr09g0325501 Lupinus albus
Lj2A232T29 Lonicera japonica
Lj3g0008594 Lotus japonicus
Lsat_1_v5_gn_6_3681 Lactuca sativa
Manes.15G185701 Manihot esculenta
Mapoly0006s0263 Marchantia polymorpha
MCO11G470 Micromonas commoda
MD06G1026400 Malus domestica
Medtr1g009450 Medicago truncatula
Medtr5g029550 Medicago truncatula
MELO3C013825.2 Cucumis melo
Migut.A01172 Erythranthe guttata
MSTRG.24846 Avicennia marina
Nitab4.5_0002190g0020 Nicotiana tabacum
Nitab4.5_0003416g0030 Nicotiana tabacum
Nn3g19394 Nelumbo nucifera
Oeu002327.1 Olea europaea
Oeu017078.1 Olea europaea
Oeu019613.1 Olea europaea
Oeu019614.1 Olea europaea
Oeu033557.2 Olea europaea
Os10g0577700 Oryza sativa ssp. japonica
Peaxi162Scf00170g00615 Petunia axillaris
PGR042G0393 Punica granatum
PGSC0003DMG400014792 Solanum tuberosum
Phvul.002G137400 Phaseolus vulgaris
Potri.003G096600 Populus trichocarpa
Pp3c12_17740 Physcomitrium patens
PRCOL_00002339 Prasinoderma coloniale
Prupe.5G028300 Prunus persica
Psat2g138120 Pisum sativum
PSO063G4597 Papaver somniferum
PSO782G3150 Papaver somniferum
QL12p001513 Quercus lobata
RcHm_v2.0_Chr7g0211741 Rosa chinensis
Rhsim11G0021000 Rhododendron simsii
Sabra03G0065200 Salix brachista
Sc24g0002950 Simmondsia chinensis
Sed0022354 Sechium edule
SEGI_14560 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14297 Striga asiatica
SMO228G0118 Selaginella moellendorffii
Solyc08g076410.4 Solanum lycopersicum
Sopen08g024990 Solanum pennellii
Sp4g17720 Schrenkiella parvula
TAR629G2895 Trochodendron aralioides
THA.LOC104814417 Tarenaya hassleriana
Thecc.03G309800 Theobroma cacao
Thhalv10016768m.g Eutrema salsugineum
TPR.G19427 Trifolium pratense
TWI15G1160 Tripterygium wilfordii
unitig_748.g7545 Utricularia gibba
vmacro08163 Vaccinium macrocarpon
VMungo1215G0535 Vigna mungo
Zm00001eb025030 Zea mays

User provided reference genes

Program Settings