Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00050 Brassica napus
A07p02890 Brassica napus
Aa31LG6G16690 Aethionema arabicum
Ah.01g023220 Amaranthus hybridus
AL7G10360 Arabidopsis lyrata
Aqoxy5G01105 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea
AT4G38495 Arabidopsis thaliana
ATR0730G227 Amborella trichopoda
Atru.chr9.1880 Acer truncatum
AUR62010013 Chenopodium quinoa
AUR62010905 Chenopodium quinoa
AUR62013003 Chenopodium quinoa
AUR62015152 Chenopodium quinoa
AUR62021421 Chenopodium quinoa
BcaNung01304 Brassica carinata
BcaNung04221 Brassica carinata
BolC1t00014H Brassica oleracea
BraA01t00010Z Brassica rapa
BraA07t28089Z Brassica rapa
C01p00090 Brassica napus
CAN.G181.11 Capsicum annuum
CANSAT80G1040 Cannabis sativa
CARHR294230 Cardamine hirsuta
Carub.0007s0038 Capsella rubella
Ca_02756_v3 Cicer arietinum L.
Ca_02758_v3 Cicer arietinum L.
Ca_02994_v3 Cicer arietinum L.
Ca_17958_v3 Cicer arietinum L.
CBR_g12196 Chara braunii
Cc02_g30030 Coffea canephora
CDE02G2427 Ceratophyllum demersum
CDE04G1640 Ceratophyllum demersum
Ciclev10029589m.g Citrus clementina
CiPaw.10G137600 Carya illinoinensis
ClCG11G010360 Citrullus lanatus
COL.COLO4_32379 Corchorus olitorius
Cpa.g.sc182.12 Carica papaya
CsaV3_2G009990 Cucumis sativus L.
CSS0024749 Camellia sinensis var. sinensis
CSS0027024 Camellia sinensis var. sinensis
CSS0037732 Camellia sinensis var. sinensis
Dinv21074 Davidia involucrata
Dinv31631 Davidia involucrata
Duzib052G0391 Durio zibethinus
Duzib248G0743 Durio zibethinus
ECA247G3382 Erigeron canadensis
EL10Ac8g18393 Beta vulgaris
EL10Ac9g21342 Beta vulgaris
Eucgr.F02572 Eucalyptus grandis
FAN04G0013 Fragaria x ananassa
FAN08G0898 Fragaria x ananassa
FAN13G0082 Fragaria x ananassa
FAN18G0426 Fragaria x ananassa
FAN18G3769 Fragaria x ananassa
FvH4_5g23580 Fragaria vesca
Glyma.11G156931 Glycine max
Gohir.A01G010500 Gossypium hirsutum
Gohir.D01G010100 Gossypium hirsutum
Gorai.002G012200 Gossypium raimondii
GSVIVG01023976001 Vitis vinifera
HanXRQChr07g0198481 Helianthus annuus
HanXRQChr10g0314981 Helianthus annuus
HanXRQChr12g0383651 Helianthus annuus
Haze_00699 Corylus avellana
Hund14365 Selenicereus undatus
Lalb_Chr10g0093471 Lupinus albus
Lalb_Chr10g0093491 Lupinus albus
Lj6g0003235 Lotus japonicus
Lsat_1_v5_gn_1_25060 Lactuca sativa
Manes.11G097800 Manihot esculenta
Mapoly0028s0104 Marchantia polymorpha
MD12G1003500 Malus domestica
Medtr3g082190 Medicago truncatula
MELO3C008634.2 Cucumis melo
Migut.N01297 Erythranthe guttata
MSTRG.5438 Avicennia marina
Nitab4.5_0000101g0190 Nicotiana tabacum
Nitab4.5_0000165g0190 Nicotiana tabacum
Nitab4.5_0000890g0130 Nicotiana tabacum
Nn6g31911 Nelumbo nucifera
Oeu002964.1 Olea europaea
Oeu055649.1 Olea europaea
Os04g0274400 Oryza sativa ssp. japonica
Peaxi162Scf00359g00813 Petunia axillaris
PGR042G1126 Punica granatum
PGSC0003DMG400020551 Solanum tuberosum
Phvul.005G034200 Phaseolus vulgaris
Potri.016G127200 Populus trichocarpa
Pp3c14_10610 Physcomitrium patens
Pp3c14_10611 Physcomitrium patens
Pp3c17_13790 Physcomitrium patens
Prupe.4G038000 Prunus persica
Prupe.7G004000 Prunus persica
Psat5g110600 Pisum sativum
PSO170G0646 Papaver somniferum
PSO210G5022 Papaver somniferum
QL11p052022 Quercus lobata
QL11p052248 Quercus lobata
RcHm_v2.0_Chr7g0212881 Rosa chinensis
Rhsim11G0193500 Rhododendron simsii
Sabra16G0121200 Salix brachista
Sabra16G0121700 Salix brachista
Sabra16G0122100 Salix brachista
SalBow3G4511 Salvia bowleyana
Sc08g0002730 Simmondsia chinensis
Sed0020335 Sechium edule
Sed0025018 Sechium edule
SEGI_00696 Sequoiadendron giganteum
SGA_v2.0_scaffold207G41895 Striga asiatica
SGA_v2.0_scaffold80G25864 Striga asiatica
SHI24498 Sapria himalayana
SMO230G0118 Selaginella moellendorffii
SMO367G0732 Selaginella moellendorffii
Solyc06g007480.3 Solanum lycopersicum
Sopen06g002390 Solanum pennellii
Sp7g37280 Schrenkiella parvula
TAR376G1190 Trochodendron aralioides
TAR628G0583 Trochodendron aralioides
THA.LOC104807806 Tarenaya hassleriana
Thecc.02G130200 Theobroma cacao
Thhalv10026572m.g Eutrema salsugineum
TPR.G34385 Trifolium pratense
TWI79G0531 Tripterygium wilfordii
unitig_52.g17376 Utricularia gibba
vmacro02291 Vaccinium macrocarpon
VMungo1080G1627 Vigna mungo
Zm00001eb420290 Zea mays

User provided reference genes

Program Settings