Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05470 Brassica napus
Aa31LG5G17300 Aethionema arabicum
Aa31sc208G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis
Actinidia01213 Actinidia chinensis
Ah.11g044450 Amaranthus hybridus
AL7G18910 Arabidopsis lyrata
Aqoxy7G03955 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea
AT4G32820 Arabidopsis thaliana
ATR0815G026 Amborella trichopoda
Atru.chr7.2044 Acer truncatum
AUR62009214 Chenopodium quinoa
AUR62040212 Chenopodium quinoa
BcaC09g52078 Brassica carinata
BolC1t00600H Brassica oleracea
BraA01t00520Z Brassica rapa
C01p06070 Brassica napus
CAN.G9.6 Capsicum annuum
CARHR240810 Cardamine hirsuta
Carub.0003s0455 Capsella rubella
Carub.0007s0767 Capsella rubella
Ca_15565_v3 Cicer arietinum L.
CBR_g22939 Chara braunii
Cc08_g10020 Coffea canephora
Ciclev10010526m.g Citrus clementina
CiPaw.04G074200 Carya illinoinensis
CiPaw.07G201400 Carya illinoinensis
ClCG11G015000 Citrullus lanatus
COL.COLO4_21010 Corchorus olitorius
Cpa.g.sc7.234 Carica papaya
Cpa.g.sc7.235 Carica papaya
CsaV3_3G048410 Cucumis sativus L.
CSS0000087 Camellia sinensis var. sinensis
CSS0021543 Camellia sinensis var. sinensis
CSS0029204 Camellia sinensis var. sinensis
CSS0048337 Camellia sinensis var. sinensis
DCAR_007699 Daucus carota
Dinv02537 Davidia involucrata
Dinv23402 Davidia involucrata
Duzib168G1248 Durio zibethinus
ECA240G1625 Erigeron canadensis
EL10Ac2g03960 Beta vulgaris
Eucgr.C00619 Eucalyptus grandis
FAN20G0110 Fragaria x ananassa
FvH4_2g35140 Fragaria vesca
Glyma.04G087200 Glycine max
Glyma.06G088900 Glycine max
Glyma.11G174000 Glycine max
Glyma.18G112500 Glycine max
Gohir.A07G022180 Gossypium hirsutum
Gohir.D07G023900 Gossypium hirsutum
Gorai.001G024600 Gossypium raimondii
GSVIVG01035326001 Vitis vinifera
HanXRQChr03g0077991 Helianthus annuus
Haze_01967 Corylus avellana
HPP92_019594 Vanilla planifolia
Hund19486 Selenicereus undatus
Lalb_Chr08g0242871 Lupinus albus
Lj1g0008631 Lotus japonicus
Lj8C561G12 Lonicera japonica
Lsat_1_v5_gn_0_25341 Lactuca sativa
Lsat_1_v5_gn_3_109020 Lactuca sativa
Manes.03G057600 Manihot esculenta
Mapoly0021s0014 Marchantia polymorpha
MBI01_g01249_MAGBIO Magnolia biondii
MBI04_g05153_MAGBIO Magnolia biondii
MBI04_g44310_MAGBIO Magnolia biondii
MCO10G298 Micromonas commoda
MD08G1108900 Malus domestica
MD08G1109200 Malus domestica
Medtr3g110417 Medicago truncatula
MELO3C003478.2 Cucumis melo
Migut.A00170 Erythranthe guttata
MSTRG.25925 Avicennia marina
Nitab4.5_0000318g0080 Nicotiana tabacum
Nitab4.5_0002021g0060 Nicotiana tabacum
Nn8g39007 Nelumbo nucifera
Oeu038827.1 Olea europaea
Os03g0685750 Oryza sativa ssp. japonica
Peaxi162Scf00840g00428 Petunia axillaris
Peaxi162Scf00840g00429 Petunia axillaris
PGR031G1631 Punica granatum
Phvul.003G090001 Phaseolus vulgaris
Phvul.009G112700 Phaseolus vulgaris
Potri.018G057900 Populus trichocarpa
Pp3c4_1880 Physcomitrium patens
Prupe.1G443500 Prunus persica
Psat0s3156g0040 Pisum sativum
Psat2g119040 Pisum sativum
Psat3g171600 Pisum sativum
Psat4g077000 Pisum sativum
Psat4g077080 Pisum sativum
Psat6g116480 Pisum sativum
PSO210G2191 Papaver somniferum
PSO210G7354 Papaver somniferum
QL12p040855 Quercus lobata
RcHm_v2.0_Chr6g0306811 Rosa chinensis
Rhsim11G0049000 Rhododendron simsii
Sabra06G0183100 Salix brachista
SalBow4G1475 Salvia bowleyana
Sc09g0009530 Simmondsia chinensis
Sed0028022 Sechium edule
SGA_v2.0_scaffold103G30057 Striga asiatica
SHI18802 Sapria himalayana
SHI18803 Sapria himalayana
SHI18807 Sapria himalayana
SMO273G0062 Selaginella moellendorffii
SMO365G0056 Selaginella moellendorffii
Solyc08g066000.2 Solanum lycopersicum
Solyc08g066010.2 Solanum lycopersicum
Sopen08g019670 Solanum pennellii
Sp7g30590 Schrenkiella parvula
TAR636G0297 Trochodendron aralioides
TAR636G1718 Trochodendron aralioides
TAR636G2276 Trochodendron aralioides
THA.LOC104818581 Tarenaya hassleriana
Thecc.09G049200 Theobroma cacao
Thhalv10026823m.g Eutrema salsugineum
TPR.G12374 Trifolium pratense
TWI34G0160 Tripterygium wilfordii
unitig_0.g2566 Utricularia gibba
vmacro00180 Vaccinium macrocarpon
VMungo1309G3161 Vigna mungo
Zm00001eb053280 Zea mays
Zm00001eb053290 Zea mays
Zm00001eb053300 Zea mays
Zm00001eb053310 Zea mays

User provided reference genes

Program Settings