Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31630 Brassica napus
Aa31LG1G17100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1847 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1848 Anthoceros agrestis
Actinidia12211 Actinidia chinensis
Actinidia35264 Actinidia chinensis
Ah.03g141370 Amaranthus hybridus
Ah.14g080600 Amaranthus hybridus
AL8G42310 Arabidopsis lyrata
Aqoxy7G04042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea
AT5G64830 Arabidopsis thaliana
ATR0665G503 Amborella trichopoda
Atru.chr4.339 Acer truncatum
AUR62003302 Chenopodium quinoa
AUR62016283 Chenopodium quinoa
BcaB02g09834 Brassica carinata
BcaC01g02716 Brassica carinata
BolC3t18393H Brassica oleracea
BraA06t26099Z Brassica rapa
C03p61330 Brassica napus
CAN.G347.1 Capsicum annuum
CANSAT80G2857 Cannabis sativa
CARHR278840 Cardamine hirsuta
Carub.0008s2566 Capsella rubella
Ca_16897_v3 Cicer arietinum L.
CBR_g30690 Chara braunii
Cc07_g16320 Coffea canephora
CDE09G1360 Ceratophyllum demersum
Cfa002758 Carpinus fangiana
Ciclev10026167m.g Citrus clementina
CiPaw.04G091300 Carya illinoinensis
ClCG11G005560 Citrullus lanatus
COL.COLO4_11003 Corchorus olitorius
Cpa.g.sc191.11 Carica papaya
Cre14.g608500 Chlamydomonas reinhardtii
CsaV3_6G002440 Cucumis sativus L.
DCAR_001374 Daucus carota
Dinv19481 Davidia involucrata
Dinv42687 Davidia involucrata
Duzib147G1554 Durio zibethinus
Duzib264G0573 Durio zibethinus
ECA238G3253 Erigeron canadensis
EL10Ac6g14758 Beta vulgaris
Eucgr.H04843 Eucalyptus grandis
Eucgr.H04846 Eucalyptus grandis
Eucgr.H04852 Eucalyptus grandis
Eucgr.H04856 Eucalyptus grandis
Eucgr.H04859 Eucalyptus grandis
Eucgr.H04861 Eucalyptus grandis
FAN19G1269 Fragaria x ananassa
FAN23G0816 Fragaria x ananassa
FAN26G2148 Fragaria x ananassa
FvH4_1g22740 Fragaria vesca
Glyma.04G218800 Glycine max
Glyma.06G147000 Glycine max
Gohir.A11G197900 Gossypium hirsutum
Gohir.D11G231600 Gossypium hirsutum
Gorai.007G244700 Gossypium raimondii
GSVIVG01022231001 Vitis vinifera
GSVIVG01022236001 Vitis vinifera
HanXRQChr08g0218711 Helianthus annuus
HanXRQChr14g0445741 Helianthus annuus
Haze_25050 Corylus avellana
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla
HPP92_016462 Vanilla planifolia
HPP92_027147 Vanilla planifolia
Hund03536 Selenicereus undatus
Lalb_Chr11g0068091 Lupinus albus
Lj1g0022742 Lotus japonicus
Lj2C566T4 Lonicera japonica
Lsat_1_v5_gn_2_67140 Lactuca sativa
Lsat_1_v5_gn_2_93681 Lactuca sativa
Manes.12G143200 Manihot esculenta
Mapoly0014s0114 Marchantia polymorpha
MBI05_g29098_MAGBIO Magnolia biondii
MCO11G927 Micromonas commoda
MD15G1331600 Malus domestica
Medtr3g095020 Medicago truncatula
MELO3C025043.2 Cucumis melo
Migut.L00069 Erythranthe guttata
MSTRG.15753 Avicennia marina
Nitab4.5_0004840g0040 Nicotiana tabacum
Nitab4.5_0015691g0010 Nicotiana tabacum
Nn5g28889 Nelumbo nucifera
Oeu028521.1 Olea europaea
Oeu028522.1 Olea europaea
Os04g0640800 Oryza sativa ssp. japonica
Peaxi162Scf00106g00208 Petunia axillaris
PGR102G0730 Punica granatum
PGSC0003DMG400031208 Solanum tuberosum
Phvul.009G139000 Phaseolus vulgaris
Potri.007G080500 Populus trichocarpa
Pp3c16_16240 Physcomitrium patens
PRCOL_00001898 Prasinoderma coloniale
Prupe.6G171600 Prunus persica
Psat5g066000 Pisum sativum
PSO170G1695 Papaver somniferum
PSO210G3121 Papaver somniferum
QL06p031976 Quercus lobata
RcHm_v2.0_Chr2g0117041 Rosa chinensis
Rhsim08G0006100 Rhododendron simsii
Sabra07G0067600 Salix brachista
SalBow5G2487 Salvia bowleyana
Sc03g0004370 Simmondsia chinensis
Sed0017229 Sechium edule
SEGI_25559 Sequoiadendron giganteum
SGA_v2.0_scaffold32G12965 Striga asiatica
SGA_v2.0_scaffold34G13625 Striga asiatica
SGA_v2.0_scaffold47G17703 Striga asiatica
SHI11720 Sapria himalayana
SMO358G0378 Selaginella moellendorffii
Solyc04g051780.3 Solanum lycopersicum
Sopen04g023130 Solanum pennellii
Sp2g27910 Schrenkiella parvula
TAR381G0823 Trochodendron aralioides
TAR628G0645 Trochodendron aralioides
THA.LOC104818474 Tarenaya hassleriana
Thecc.01G113900 Theobroma cacao
Thhalv10004393m.g Eutrema salsugineum
TPR.G23729 Trifolium pratense
TWI74G0604 Tripterygium wilfordii
unitig_62.g23431 Utricularia gibba
vmacro18637 Vaccinium macrocarpon
VMungo1309G1738 Vigna mungo
Zm00001eb068990 Zea mays
Zm00001eb367030 Zea mays
Zm00001eb431860 Zea mays

User provided reference genes

Program Settings