Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p26910 Brassica napus
A07p44800 Brassica napus
Aa31LG4G1200 Aethionema arabicum
Aa31LG7G580 Aethionema arabicum
Actinidia18251 Actinidia chinensis
Actinidia25476 Actinidia chinensis
AL1G28160 Arabidopsis lyrata
AL2G40490 Arabidopsis lyrata
Aqoxy7G03387 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CEK6A4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1DY4U Arachis hypogaea
AT1G16000 Arabidopsis thaliana
AT1G80890 Arabidopsis thaliana
ATR0580G075 Amborella trichopoda
Atru.chr1.2788 Acer truncatum
AUR62034053 Chenopodium quinoa
AUR62040628 Chenopodium quinoa
BcaB02g08714 Brassica carinata
BcaB05g25217 Brassica carinata
BcaC08g45345 Brassica carinata
BcaC08g47537 Brassica carinata
BNapus_Darmor_BZH_scaffold_293p00030 Brassica napus
BolC2t09694H Brassica oleracea
BolC6t38124H Brassica oleracea
BolC6t38413H Brassica oleracea
BolC6t40378H Brassica oleracea
BraA07t30336Z Brassica rapa
BraA07t31987Z Brassica rapa
C06p29590 Brassica napus
C06p53620 Brassica napus
CAN.G407.2 Capsicum annuum
CANSAT56G2558 Cannabis sativa
CARHR016510 Cardamine hirsuta
CARHR073580 Cardamine hirsuta
Carub.0001s1580 Capsella rubella
Ca_06644_v3 Cicer arietinum L.
CBR_g24249 Chara braunii
Cc04_g05190 Coffea canephora
CDE03G0106 Ceratophyllum demersum
CDE06G2663 Ceratophyllum demersum
Cfa017829 Carpinus fangiana
Ciclev10026865m.g Citrus clementina
CiPaw.09G167300 Carya illinoinensis
ClCG09G003380 Citrullus lanatus
COL.COLO4_26743 Corchorus olitorius
Cpa.g.sc10.63 Carica papaya
CsaV3_7G031850 Cucumis sativus L.
CSS0032300 Camellia sinensis var. sinensis
DCAR_021146 Daucus carota
Dinv21417 Davidia involucrata
Dinv23278 Davidia involucrata
Duzib160G0610 Durio zibethinus
Duzib235G1153 Durio zibethinus
ECA246G3825 Erigeron canadensis
EL10Ac8g19423 Beta vulgaris
Eucgr.J03118 Eucalyptus grandis
FAN02G1155 Fragaria x ananassa
FAN05G4250 Fragaria x ananassa
FAN14G2502 Fragaria x ananassa
FvH4_6g28500 Fragaria vesca
Glyma.07G021900 Glycine max
Glyma.08G219900 Glycine max
Gohir.A06G114500 Gossypium hirsutum
Gohir.D06G119100 Gossypium hirsutum
Gorai.010G136700 Gossypium raimondii
GSVIVG01015983001 Vitis vinifera
HanXRQChr05g0153751 Helianthus annuus
HanXRQChr08g0219721 Helianthus annuus
Haze_20423 Corylus avellana
Hma1.2p1_0329F.1_g127170 Hydrangea macrophylla
HPP92_003757 Vanilla planifolia
Lalb_Chr04g0264571 Lupinus albus
Lj3g0014233 Lotus japonicus
Manes.04G101402 Manihot esculenta
Manes.11G068700 Manihot esculenta
Mapoly0116s0019 Marchantia polymorpha
MBI14_g09098_MAGBIO Magnolia biondii
MD09G1225600 Malus domestica
MD17G1224400 Malus domestica
Medtr4g007290 Medicago truncatula
MELO3C023472.2 Cucumis melo
Migut.I00687 Erythranthe guttata
Nitab4.5_0002700g0200 Nicotiana tabacum
Nitab4.5_0009867g0040 Nicotiana tabacum
Oeu009806.1 Olea europaea
Os08g0272000 Oryza sativa ssp. japonica
Os12g0556400 Oryza sativa ssp. japonica
Peaxi162Scf00553g00539 Petunia axillaris
PGR031G3360 Punica granatum
PGR037G0004 Punica granatum
PGSC0003DMG400014151 Solanum tuberosum
Phvul.010G162500 Phaseolus vulgaris
Potri.001G043300 Populus trichocarpa
Potri.003G183501 Populus trichocarpa
Potri.004G051201 Populus trichocarpa
Pp3c10_10990 Physcomitrium patens
Prupe.2G074900 Prunus persica
Prupe.3G100100 Prunus persica
Psat7g263200 Pisum sativum
PSO782G1324 Papaver somniferum
QL04p040226 Quercus lobata
QL07p030560 Quercus lobata
QL07p031505 Quercus lobata
RcHm_v2.0_Chr2g0132751 Rosa chinensis
Rhsim08G0204300 Rhododendron simsii
Sabra01G0029800 Salix brachista
Sabra03G0134100 Salix brachista
SalBow6G4114 Salvia bowleyana
SalBow7G4057 Salvia bowleyana
Sc12g0007910 Simmondsia chinensis
Sed0010339 Sechium edule
Sed0014955 Sechium edule
SEGI_23088 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02790 Striga asiatica
Solyc03g117580.3 Solanum lycopersicum
Sopen03g036490 Solanum pennellii
Sp1g14310 Schrenkiella parvula
Sp5g34850 Schrenkiella parvula
TAR383G0490 Trochodendron aralioides
THA.LOC104808176 Tarenaya hassleriana
Thecc.06G043200 Theobroma cacao
Thhalv10009235m.g Eutrema salsugineum
Thhalv10019388m.g Eutrema salsugineum
TPR.G29449 Trifolium pratense
TPR.G3325 Trifolium pratense
TWI12G0957 Tripterygium wilfordii
unitig_62.g23831 Utricularia gibba
vmacro19061 Vaccinium macrocarpon
Zm00001eb176360 Zea mays

User provided reference genes

Program Settings