Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p45080 Brassica napus
Aa31LG10G7030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.168 Anthoceros agrestis
Actinidia13519 Actinidia chinensis
Ah.07g200930 Amaranthus hybridus
AL5G32490 Arabidopsis lyrata
Aqoxy6G00002 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9L3MVK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BTS312 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XG2HYZ Arachis hypogaea
AT3G51980 Arabidopsis thaliana
ATR0582G035 Amborella trichopoda
Atru.chr12.1487 Acer truncatum
AUR62007355 Chenopodium quinoa
AUR62018637 Chenopodium quinoa
AUR62018638 Chenopodium quinoa
AUR62039304 Chenopodium quinoa
BcaB01g00386 Brassica carinata
BcaB01g00394 Brassica carinata
BcaB01g00454 Brassica carinata
BcaC09g49821 Brassica carinata
BcaC09g49822 Brassica carinata
BcaC09g49825 Brassica carinata
BolC4t24736H Brassica oleracea
BolC8t50344H Brassica oleracea
BraA09t39969Z Brassica rapa
C01p32570 Brassica napus
C08p27270 Brassica napus
CAN.G624.16 Capsicum annuum
CARHR161640 Cardamine hirsuta
Carub.0005s1833 Capsella rubella
Ca_16273_v3 Cicer arietinum L.
CBR_g16829 Chara braunii
Cc11_g14840 Coffea canephora
CDE04G2001 Ceratophyllum demersum
CDE07G0286 Ceratophyllum demersum
Cfa023403 Carpinus fangiana
Ciclev10028563m.g Citrus clementina
CiPaw.05G096700 Carya illinoinensis
ClCG06G001650 Citrullus lanatus
COL.COLO4_15650 Corchorus olitorius
Cpa.g.sc252.15 Carica papaya
Cre07.g323500 Chlamydomonas reinhardtii
CsaV3_6G007640 Cucumis sativus L.
CSS0017548 Camellia sinensis var. sinensis
CSS0037190 Camellia sinensis var. sinensis
DCAR_023486 Daucus carota
Dinv07617 Davidia involucrata
Duzib264G0674 Durio zibethinus
ECA234G2504 Erigeron canadensis
EL10Ac5g12009 Beta vulgaris
Eucgr.B03575 Eucalyptus grandis
FAN07G1474 Fragaria x ananassa
FAN12G4288 Fragaria x ananassa
FvH4_4g21990 Fragaria vesca
Glyma.20G054300 Glycine max
Glyma.20G054400 Glycine max
Gohir.A11G059600 Gossypium hirsutum
Gohir.D11G063700 Gossypium hirsutum
Gorai.007G068900 Gossypium raimondii
GSVIVG01001139001 Vitis vinifera
HanXRQChr16g0516431 Helianthus annuus
Haze_12544 Corylus avellana
Hma1.2p1_0073F.1_g038620 Hydrangea macrophylla
HPP92_007055 Vanilla planifolia
HPP92_025319 Vanilla planifolia
Hund14375 Selenicereus undatus
Lalb_Chr12g0202061 Lupinus albus
Lj2g0003712 Lotus japonicus
Lj3C1079T4 Lonicera japonica
Lj6g0015569 Lotus japonicus
Lsat_1_v5_gn_4_1741 Lactuca sativa
Manes.08G098100 Manihot esculenta
Mapoly0124s0025 Marchantia polymorpha
MBI07_g11054_MAGBIO Magnolia biondii
MBI11_g04258_MAGBIO Magnolia biondii
MBI11_g33503_MAGBIO Magnolia biondii
MCO07G742 Micromonas commoda
MD13G1135300 Malus domestica
Medtr3g080080 Medicago truncatula
MELO3C022368.2 Cucumis melo
Migut.H01174 Erythranthe guttata
Migut.K01149 Erythranthe guttata
Nitab4.5_0002113g0090 Nicotiana tabacum
Nitab4.5_0007261g0070 Nicotiana tabacum
Nn3g16171 Nelumbo nucifera
Oeu036874.2 Olea europaea
Os09g0512700 Oryza sativa ssp. japonica
Peaxi162Scf00760g00014 Petunia axillaris
PGR102G0396 Punica granatum
PGSC0003DMG400013211 Solanum tuberosum
PGSC0003DMG400032561 Solanum tuberosum
Phvul.006G013100 Phaseolus vulgaris
Potri.001G072200 Populus trichocarpa
Potri.003G158701 Populus trichocarpa
Pp3c20_2600 Physcomitrium patens
PRCOL_00004534 Prasinoderma coloniale
Prupe.1G210000 Prunus persica
Psat5g111880 Pisum sativum
PSO478G0970 Papaver somniferum
QL03p046914 Quercus lobata
RcHm_v2.0_Chr4g0428181 Rosa chinensis
Rhsim12G0090900 Rhododendron simsii
Sabra01G0050800 Salix brachista
Sabra03G0115100 Salix brachista
SalBow2G0521 Salvia bowleyana
Sc07g0008580 Simmondsia chinensis
Sed0027865 Sechium edule
SEGI_34276 Sequoiadendron giganteum
SEGI_37385 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45757 Striga asiatica
SHI10577 Sapria himalayana
SHI51501 Sapria himalayana
SMO367G0194 Selaginella moellendorffii
Solyc04g009320.3 Solanum lycopersicum
Sopen04g004440 Solanum pennellii
Sopen11g017280 Solanum pennellii
Sp5g10290 Schrenkiella parvula
TAR374G1410 Trochodendron aralioides
THA.LOC104823032 Tarenaya hassleriana
Thecc.01G233200 Theobroma cacao
Thhalv10010449m.g Eutrema salsugineum
TPR.G310 Trifolium pratense
TWI36G1213 Tripterygium wilfordii
unitig_749.g13336 Utricularia gibba
vmacro15977 Vaccinium macrocarpon
VMungo0540G0877 Vigna mungo
Zm00001eb097710 Zea mays
Zm00001eb318160 Zea mays

User provided reference genes

Program Settings