Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43540 Brassica napus
A09p08880 Brassica napus
Aa31LG1G17070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2612 Anthoceros agrestis
Actinidia05860 Actinidia chinensis
Ah.02g125980 Amaranthus hybridus
Aqoxy6G00482 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AFE07A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UD5YJS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3LRN9 Arachis hypogaea
AT5G64860 Arabidopsis thaliana
ATR0564G344 Amborella trichopoda
Atru.chr1.3653 Acer truncatum
Atru.chr4.351 Acer truncatum
AUR62003308 Chenopodium quinoa
AUR62016277 Chenopodium quinoa
BcaB04g19998 Brassica carinata
BcaC04g23275 Brassica carinata
BolC2t12429H Brassica oleracea
BolC9t53930H Brassica oleracea
BraA09t36539Z Brassica rapa
C02p63630 Brassica napus
C09p10300 Brassica napus
CAN.G276.3 Capsicum annuum
CANSAT01G3221 Cannabis sativa
CARHR278870 Cardamine hirsuta
Carub.0008s2569 Capsella rubella
Ca_16892_v3 Cicer arietinum L.
CBR_g16839 Chara braunii
CBR_g31505 Chara braunii
Cc00_g25280 Coffea canephora
Cc03_g11750 Coffea canephora
CDE09G0932 Ceratophyllum demersum
CDE11G1197 Ceratophyllum demersum
Ciclev10025236m.g Citrus clementina
CiPaw.04G092000 Carya illinoinensis
ClCG02G013390 Citrullus lanatus
COL.COLO4_11015 Corchorus olitorius
Cpa.g.sc196.11 Carica papaya
Cre03.g181500 Chlamydomonas reinhardtii
CsaV3_2G017550 Cucumis sativus L.
CSS0019172 Camellia sinensis var. sinensis
CSS0049107 Camellia sinensis var. sinensis
DCAR_010077 Daucus carota
Dinv19489 Davidia involucrata
Duzib147G0722 Durio zibethinus
ECA238G0742 Erigeron canadensis
EL10Ac6g14753 Beta vulgaris
Eucgr.I00325 Eucalyptus grandis
FAN19G1919 Fragaria x ananassa
FAN23G0349 Fragaria x ananassa
FAN28G2353 Fragaria x ananassa
FvH4_1g22230 Fragaria vesca
Glyma.04G219500 Glycine max
Glyma.06G146400 Glycine max
Glyma.10G141200 Glycine max
Glyma.15G207800 Glycine max
Gohir.A02G135000 Gossypium hirsutum
Gohir.D03G045900 Gossypium hirsutum
Gorai.003G047100 Gossypium raimondii
GSVIVG01022223001 Vitis vinifera
HanXRQChr15g0484401 Helianthus annuus
HanXRQChr15g0494861 Helianthus annuus
HanXRQChr16g0507001 Helianthus annuus
Haze_25037 Corylus avellana
Hma1.2p1_0375F.1_g138700 Hydrangea macrophylla
Hma1.2p1_0375F.1_g138710 Hydrangea macrophylla
Hma1.2p1_0375F.1_g138730 Hydrangea macrophylla
HPP92_016849 Vanilla planifolia
Hund19657 Selenicereus undatus
Lalb_Chr08g0238881 Lupinus albus
Lj1g0008968 Lotus japonicus
Lj4C877G13 Lonicera japonica
Lsat_1_v5_gn_2_67361 Lactuca sativa
Manes.12G142500 Manihot esculenta
Mapoly0007s0077 Marchantia polymorpha
MBI05_g43693_MAGBIO Magnolia biondii
MCO01G332 Micromonas commoda
MD01G1019100 Malus domestica
MD01G1019200 Malus domestica
MD15G1333300 Malus domestica
Medtr3g094840 Medicago truncatula
MELO3C020949.2 Cucumis melo
Migut.L00074 Erythranthe guttata
MSTRG.15748 Avicennia marina
Nitab4.5_0000471g0040 Nicotiana tabacum
Nn1g05190 Nelumbo nucifera
Nn5g28915 Nelumbo nucifera
Os07g0627000 Oryza sativa ssp. japonica
Peaxi162Scf00323g00517 Petunia axillaris
PGR004G1464 Punica granatum
PGSC0003DMG400016589 Solanum tuberosum
Phvul.009G139500 Phaseolus vulgaris
Potri.007G081400 Populus trichocarpa
Pp3c20_17800 Physcomitrium patens
Pp3c6_28760 Physcomitrium patens
Pp3c8_6000 Physcomitrium patens
PRCOL_00006523 Prasinoderma coloniale
Prupe.6G173200 Prunus persica
Psat5g065400 Pisum sativum
PSO675G5066 Papaver somniferum
QL06p032201 Quercus lobata
RcHm_v2.0_Chr2g0116371 Rosa chinensis
Rhsim10G0151000 Rhododendron simsii
Sabra07G0068400 Salix brachista
SalBow5G0625 Salvia bowleyana
SalBow5G3003 Salvia bowleyana
Sc03g0004320 Simmondsia chinensis
Sed0002401 Sechium edule
SEGI_21408 Sequoiadendron giganteum
SEGI_23685 Sequoiadendron giganteum
SEGI_24493 Sequoiadendron giganteum
SEGI_26254 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13619 Striga asiatica
SMO164G0033 Selaginella moellendorffii
SMO164G0070 Selaginella moellendorffii
Solyc04g053120.3 Solanum lycopersicum
Sopen04g023470 Solanum pennellii
Sp2g27940 Schrenkiella parvula
TAR628G0801 Trochodendron aralioides
THA.LOC104818477 Tarenaya hassleriana
Thecc.01G112500 Theobroma cacao
Thhalv10003902m.g Eutrema salsugineum
TPR.G23750 Trifolium pratense
TWI53G1580 Tripterygium wilfordii
unitig_88.g27738 Utricularia gibba
vmacro12904 Vaccinium macrocarpon
vmacro12905 Vaccinium macrocarpon
Zm00001eb328070 Zea mays

User provided reference genes

Program Settings