Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p37300 Brassica napus
A10p02120 Brassica napus
Aa31LG1G20930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis
Actinidia09875 Actinidia chinensis
Actinidia11067 Actinidia chinensis
Ah.08g220260 Amaranthus hybridus
AL1G13100 Arabidopsis lyrata
Aqoxy4G01223 Aquilegia oxysepala
AT1G03600 Arabidopsis thaliana
ATR0693G305 Amborella trichopoda
Atru.chr6.3034 Acer truncatum
AUR62028441 Chenopodium quinoa
AUR62041946 Chenopodium quinoa
BcaB02g06915 Brassica carinata
BcaC05g24519 Brassica carinata
BcaC07g36953 Brassica carinata
BolC5t28981H Brassica oleracea
BolC8t46868H Brassica oleracea
BraA08t35627Z Brassica rapa
BraA10t42481Z Brassica rapa
C05p02030 Brassica napus
C08p00700 Brassica napus
CANSAT64G2665 Cannabis sativa
CARHR002940 Cardamine hirsuta
Carub.0001s0272 Capsella rubella
Ca_01513_v3 Cicer arietinum L.
CBR_g50764 Chara braunii
Cc05_g06750 Coffea canephora
CDE05G0569 Ceratophyllum demersum
CDE05G3372 Ceratophyllum demersum
Cfa014568 Carpinus fangiana
Ciclev10016927m.g Citrus clementina
CiPaw.04G123900 Carya illinoinensis
ClCG02G001140 Citrullus lanatus
COL.COLO4_35403 Corchorus olitorius
Cpa.g.sc1227.1 Carica papaya
Cre05.g243800 Chlamydomonas reinhardtii
CsaV3_7G004300 Cucumis sativus L.
CSS0015532 Camellia sinensis var. sinensis
CSS0031699 Camellia sinensis var. sinensis
DCAR_019192 Daucus carota
Dinv03833 Davidia involucrata
Dinv23684 Davidia involucrata
Duzib052G1052 Durio zibethinus
Duzib132G1267 Durio zibethinus
Duzib248G0317 Durio zibethinus
ECA246G1074 Erigeron canadensis
Eucgr.K00947 Eucalyptus grandis
FAN02G4183 Fragaria x ananassa
FAN05G1351 Fragaria x ananassa
FAN09G2594 Fragaria x ananassa
FAN14G2522 Fragaria x ananassa
FvH4_6g45050 Fragaria vesca
Glyma.12G202500 Glycine max
Glyma.13G299200 Glycine max
Gohir.A01G015900 Gossypium hirsutum
Gohir.A12G137300 Gossypium hirsutum
Gohir.D01G015900 Gossypium hirsutum
Gohir.D12G141300 Gossypium hirsutum
Gorai.002G017600 Gossypium raimondii
Gorai.008G152600 Gossypium raimondii
GSVIVG01030552001 Vitis vinifera
HanXRQChr17g0542591 Helianthus annuus
Haze_13113 Corylus avellana
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla
HPP92_017628 Vanilla planifolia
Lalb_Chr14g0366761 Lupinus albus
Lalb_Chr24g0399841 Lupinus albus
Lj1P733T48 Lonicera japonica
Lj3g0001000 Lotus japonicus
Lj8P115T48 Lonicera japonica
Lsat_1_v5_gn_3_39480 Lactuca sativa
Manes.08G098700 Manihot esculenta
Mapoly0049s0056 Marchantia polymorpha
MBI02_g19258_MAGBIO Magnolia biondii
MCO14G469 Micromonas commoda
MD09G1090500 Malus domestica
MD17G1079700 Malus domestica
Medtr2g090200 Medicago truncatula
MELO3C018748.2 Cucumis melo
Migut.H01055 Erythranthe guttata
MSTRG.12305 Avicennia marina
MSTRG.14200 Avicennia marina
Nitab4.5_0001090g0130 Nicotiana tabacum
Nitab4.5_0005380g0050 Nicotiana tabacum
Nn1g03988 Nelumbo nucifera
Oeu029929.1 Olea europaea
Oeu040003.1 Olea europaea
Os03g0333400 Oryza sativa ssp. japonica
Peaxi162Scf00132g00062 Petunia axillaris
Peaxi162Scf00610g00313 Petunia axillaris
PGR142G3842 Punica granatum
PGSC0003DMG400018360 Solanum tuberosum
Phvul.005G105900 Phaseolus vulgaris
Potri.002G056300 Populus trichocarpa
Potri.005G206200 Populus trichocarpa
Pp3c9_26020 Physcomitrium patens
Prupe.3G235100 Prunus persica
Psat7g036720 Pisum sativum
PSO210G0967 Papaver somniferum
PSO832G3416 Papaver somniferum
QL08p037826 Quercus lobata
RcHm_v2.0_Chr2g0162381 Rosa chinensis
Rhsim06G0148500 Rhododendron simsii
Sabra02G0045600 Salix brachista
Sabra05G0156800 Salix brachista
Sc12g0002830 Simmondsia chinensis
Sed0009578 Sechium edule
Sed0024793 Sechium edule
SEGI_04908 Sequoiadendron giganteum
SGA_v2.0_scaffold356G49787 Striga asiatica
SMO364G0930 Selaginella moellendorffii
Solyc07g054290.1 Solanum lycopersicum
Sopen07g028230 Solanum pennellii
Sp1g02510 Schrenkiella parvula
TAR627G0228 Trochodendron aralioides
THA.LOC104801178 Tarenaya hassleriana
THA.LOC104827374 Tarenaya hassleriana
Thecc.02G175700 Theobroma cacao
Thhalv10008901m.g Eutrema salsugineum
TPR.G35547 Trifolium pratense
TWI18G1016 Tripterygium wilfordii
TWI75G0783 Tripterygium wilfordii
unitig_26.g9943 Utricularia gibba
unitig_749.g13954 Utricularia gibba
VMungo1080G1219 Vigna mungo
Zm00001eb015950 Zea mays
Zm00001eb395230 Zea mays

User provided reference genes

Program Settings