Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p28250 Brassica napus
Aa31LG4G6950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5093 Anthoceros agrestis
Actinidia15143 Actinidia chinensis
Ah.08g215970 Amaranthus hybridus
AL2G37050 Arabidopsis lyrata
Aqoxy5G02132 Aquilegia oxysepala
AT1G76920 Arabidopsis thaliana
ATR0772G199 Amborella trichopoda
Atru.chr13.2189 Acer truncatum
AUR62009795 Chenopodium quinoa
AUR62009796 Chenopodium quinoa
AUR62039241 Chenopodium quinoa
AUR62039242 Chenopodium quinoa
BcaB02g07084 Brassica carinata
BcaB05g25019 Brassica carinata
BcaC08g45501 Brassica carinata
BolC6t38302H Brassica oleracea
BraA07t30466Z Brassica rapa
C06p31720 Brassica napus
CAN.G175.3 Capsicum annuum
CANSAT25G1256 Cannabis sativa
CARHR070420 Cardamine hirsuta
Carub.0002s2378 Capsella rubella
Ca_27292_v3 Cicer arietinum L.
Cc10_g14550 Coffea canephora
CDE08G0205 Ceratophyllum demersum
Cfa018335 Carpinus fangiana
Ciclev10001576m.g Citrus clementina
CiPaw.16G014300 Carya illinoinensis
COL.COLO4_24672 Corchorus olitorius
Cpa.g.sc21.182 Carica papaya
CSS0028797 Camellia sinensis var. sinensis
DCAR_010096 Daucus carota
Dinv41097 Davidia involucrata
Duzib041G0274 Durio zibethinus
Duzib116G0820 Durio zibethinus
ECA247G0840 Erigeron canadensis
EL10Ac7g15790 Beta vulgaris
Eucgr.F02716 Eucalyptus grandis
FAN14G0378 Fragaria x ananassa
FAN15G0766 Fragaria x ananassa
FAN24G0263 Fragaria x ananassa
FAN27G1342 Fragaria x ananassa
FvH4_2g14200 Fragaria vesca
FvH4_3g14282 Fragaria vesca
FvH4_6g34680 Fragaria vesca
FvH4_6g34681 Fragaria vesca
Glyma.02G083400 Glycine max
Gohir.A05G269900 Gossypium hirsutum
Gohir.D05G271900 Gossypium hirsutum
Gorai.009G284900 Gossypium raimondii
GSVIVG01034899001 Vitis vinifera
HanXRQChr02g0039921 Helianthus annuus
Haze_17740 Corylus avellana
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla
HPP92_009302 Vanilla planifolia
Hund26709 Selenicereus undatus
Lalb_Chr19g0130321 Lupinus albus
Lj2g0010896 Lotus japonicus
Lj7A371T45 Lonicera japonica
Lj7A371T46 Lonicera japonica
Lsat_1_v5_gn_1_8460 Lactuca sativa
Manes.02G177800 Manihot esculenta
MBI17_g34067_MAGBIO Magnolia biondii
MD05G1021300 Malus domestica
MD10G1022100 Malus domestica
Medtr6g034935 Medicago truncatula
Medtr6g049050 Medicago truncatula
Migut.C01010 Erythranthe guttata
Migut.N03218 Erythranthe guttata
MSTRG.1356 Avicennia marina
MSTRG.22368 Avicennia marina
MSTRG.25314 Avicennia marina
Nitab4.5_0000032g0440 Nicotiana tabacum
Nitab4.5_0006608g0010 Nicotiana tabacum
Nn1g06119 Nelumbo nucifera
Oeu032982.1 Olea europaea
Oeu046020.2 Olea europaea
Os04g0686700 Oryza sativa ssp. japonica
Peaxi162Scf00263g01414 Petunia axillaris
PGR042G1057 Punica granatum
PGR122G0006 Punica granatum
PGSC0003DMG400000797 Solanum tuberosum
Phvul.004G097500 Phaseolus vulgaris
Potri.002G069900 Populus trichocarpa
Potri.005G190400 Populus trichocarpa
Prupe.8G025000 Prunus persica
Psat0s3019g0080 Pisum sativum
PSO541G3056 Papaver somniferum
PSO675G2834 Papaver somniferum
QL02p024207 Quercus lobata
RcHm_v2.0_Chr2g0119661 Rosa chinensis
RcHm_v2.0_Chr6g0276341 Rosa chinensis
Rhsim05G0182400 Rhododendron simsii
Sabra02G0054600 Salix brachista
SalBow7G1400 Salvia bowleyana
Sc20g0003450 Simmondsia chinensis
Sed0010814 Sechium edule
Sed0024386 Sechium edule
SEGI_30218 Sequoiadendron giganteum
SGA_v2.0_scaffold17G07917 Striga asiatica
SGA_v2.0_scaffold48G17978 Striga asiatica
Solyc04g071130.1 Solanum lycopersicum
Sopen04g027070 Solanum pennellii
SpUn0346_0010 Schrenkiella parvula
TAR381G1603 Trochodendron aralioides
TAR625G1556 Trochodendron aralioides
THA.LOC104812044 Tarenaya hassleriana
THA.LOC104813707 Tarenaya hassleriana
Thecc.08G149100 Theobroma cacao
Thhalv10019824m.g Eutrema salsugineum
TPR.G36696 Trifolium pratense
TWI32G1226 Tripterygium wilfordii
TWI34G0188 Tripterygium wilfordii
unitig_26.g9903 Utricularia gibba
unitig_26.g9904 Utricularia gibba
unitig_749.g13920 Utricularia gibba
VMungo0464G2055 Vigna mungo
VMungo1383G2819 Vigna mungo
Zm00001eb076050 Zea mays
Zm00001eb080980 Zea mays
Zm00001eb080990 Zea mays
Zm00001eb182860 Zea mays
Zm00001eb243390 Zea mays
Zm00001eb268540 Zea mays
Zm00001eb268560 Zea mays
Zm00001eb268570 Zea mays
Zm00001eb434300 Zea mays

User provided reference genes

Program Settings