Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16230 Brassica napus
Aa31LG3G7790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.374 Anthoceros agrestis
Actinidia13602 Actinidia chinensis
Actinidia24978 Actinidia chinensis
Ah.07g207560 Amaranthus hybridus
AL8G25560 Arabidopsis lyrata
Aqoxy3G02789 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35K7H0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8PZY5G Arachis hypogaea
AT5G51290 Arabidopsis thaliana
ATR0057G004 Amborella trichopoda
Atru.chr1.860 Acer truncatum
AUR62002234 Chenopodium quinoa
AUR62015446 Chenopodium quinoa
BcaC01g06091 Brassica carinata
BcaC01g06093 Brassica carinata
BcaC01g06116 Brassica carinata
BolC3t14299H Brassica oleracea
BolC3t14301H Brassica oleracea
BraA03t10914Z Brassica rapa
C03p19110 Brassica napus
CAN.G610.10 Capsicum annuum
CANSAT56G1053 Cannabis sativa
CARHR256750 Cardamine hirsuta
Carub.0008s1132 Capsella rubella
Ca_14070_v3 Cicer arietinum L.
Ca_14071_v3 Cicer arietinum L.
Cc02_g04600 Coffea canephora
CDE04G0237 Ceratophyllum demersum
Cfa013565 Carpinus fangiana
Ciclev10004561m.g Citrus clementina
CiPaw.08G040900 Carya illinoinensis
ClCG01G004560 Citrullus lanatus
COL.COLO4_14061 Corchorus olitorius
Cpa.g.sc13.271 Carica papaya
Cre09.g393691 Chlamydomonas reinhardtii
CsaV3_5G004820 Cucumis sativus L.
CSS0045516 Camellia sinensis var. sinensis
DCAR_000185 Daucus carota
DCAR_014629 Daucus carota
DCAR_024603 Daucus carota
Dinv16859 Davidia involucrata
Duzib068G0107 Durio zibethinus
Duzib205G0908 Durio zibethinus
ECA232G0586 Erigeron canadensis
ECA238G2778 Erigeron canadensis
EL10Ac3g05869 Beta vulgaris
Eucgr.K00133 Eucalyptus grandis
FAN03G2150 Fragaria x ananassa
FAN06G4204 Fragaria x ananassa
FAN06G4928 Fragaria x ananassa
FAN10G3673 Fragaria x ananassa
FvH4_7g27040 Fragaria vesca
Glyma.04G121300 Glycine max
Glyma.06G317600 Glycine max
Gohir.A12G197000 Gossypium hirsutum
Gohir.D12G199600 Gossypium hirsutum
Gorai.008G214800 Gossypium raimondii
GSVIVG01014003001 Vitis vinifera
HanXRQChr14g0461251 Helianthus annuus
HanXRQChr16g0512971 Helianthus annuus
Haze_22183 Corylus avellana
Hma1.2p1_1132F.1_g260060 Hydrangea macrophylla
HPP92_025696 Vanilla planifolia
Hund04575 Selenicereus undatus
Lalb_Chr15g0079671 Lupinus albus
Lalb_Chr18g0048951 Lupinus albus
Lj1C976G20 Lonicera japonica
Lj3g0026682 Lotus japonicus
Lj8A45G61 Lonicera japonica
Lsat_1_v5_gn_2_127741 Lactuca sativa
Manes.06G132300 Manihot esculenta
Mapoly0032s0128 Marchantia polymorpha
MD01G1178000 Malus domestica
MD07G1250200 Malus domestica
Medtr3g008260 Medicago truncatula
MELO3C005488.2 Cucumis melo
Migut.F00511 Erythranthe guttata
MSTRG.8838 Avicennia marina
Nitab4.5_0000694g0190 Nicotiana tabacum
Nitab4.5_0002112g0190 Nicotiana tabacum
Nn1g00903 Nelumbo nucifera
Nn6g33855 Nelumbo nucifera
Oeu021693.1 Olea europaea
Os02g0656200 Oryza sativa ssp. japonica
Peaxi162Scf00205g01426 Petunia axillaris
PGR142G3417 Punica granatum
PGSC0003DMG400030527 Solanum tuberosum
Phvul.005G009000 Phaseolus vulgaris
Potri.004G233300 Populus trichocarpa
Pp3c14_17730 Physcomitrium patens
Pp3c2_4480 Physcomitrium patens
PRCOL_00004123 Prasinoderma coloniale
PRCOL_00004591 Prasinoderma coloniale
Prupe.2G273600 Prunus persica
Psat5g228560 Pisum sativum
PSO063G4872 Papaver somniferum
PSO782G1845 Papaver somniferum
QL09p028365 Quercus lobata
QL09p028373 Quercus lobata
RcHm_v2.0_Chr1g0337211 Rosa chinensis
RcHm_v2.0_Chr1g0373861 Rosa chinensis
Rhsim03G0162800 Rhododendron simsii
SalBow3G0466 Salvia bowleyana
SalBow3G1501 Salvia bowleyana
Sc19g0002110 Simmondsia chinensis
Sed0004254 Sechium edule
SEGI_12552 Sequoiadendron giganteum
SEGI_22019 Sequoiadendron giganteum
SEGI_25249 Sequoiadendron giganteum
SGA_v2.0_scaffold216G42363 Striga asiatica
SGA_v2.0_scaffold60G20804 Striga asiatica
SMO115G0357 Selaginella moellendorffii
SMO166G0006 Selaginella moellendorffii
Solyc05g008790.4 Solanum lycopersicum
Sopen05g004550 Solanum pennellii
Sp6g13470 Schrenkiella parvula
Sp6g13480 Schrenkiella parvula
TAR629G0439 Trochodendron aralioides
THA.LOC104808276 Tarenaya hassleriana
Thecc.03G150100 Theobroma cacao
Thhalv10012981m.g Eutrema salsugineum
TPR.G12233 Trifolium pratense
TWI39G0082 Tripterygium wilfordii
unitig_37.g11924 Utricularia gibba
vmacro22349 Vaccinium macrocarpon
VMungo1080G0168 Vigna mungo
Zm00001eb186450 Zea mays

User provided reference genes

Program Settings