Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34100 Brassica napus
A06p42440 Brassica napus
Actinidia35084 Actinidia chinensis
AL5G14490 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1V8BDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.384K0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L19XPP Arachis hypogaea
AT3G25855 Arabidopsis thaliana
Atru.chr9.818 Acer truncatum
BcaB02g07811 Brassica carinata
BcaB07g30252 Brassica carinata
BcaC03g17291 Brassica carinata
BcaC06g31111 Brassica carinata
BcaC06g33947 Brassica carinata
BolC2t11319H Brassica oleracea
BolC7t44019H Brassica oleracea
BraA02t08427Z Brassica rapa
BraA06t27159Z Brassica rapa
C02p52370 Brassica napus
C07p34870 Brassica napus
CAN.G388.38 Capsicum annuum
CAN.G438.131 Capsicum annuum
CARHR146800 Cardamine hirsuta
Carub.0005s0368 Capsella rubella
Cc11_g10300 Coffea canephora
CDE05G0497 Ceratophyllum demersum
Cfa019791 Carpinus fangiana
Ciclev10022919m.g Citrus clementina
Ciclev10033455m.g Citrus clementina
CiPaw.15G083500 Carya illinoinensis
CiPaw.15G129300 Carya illinoinensis
ClCG04G011190 Citrullus lanatus
ClCG08G005220 Citrullus lanatus
Cpa.g.sc1.185 Carica papaya
CsaV3_1G006560 Cucumis sativus L.
CsaV3_6G003400 Cucumis sativus L.
CSS0049683 Camellia sinensis var. sinensis
DCAR_026728 Daucus carota
Dinv09807 Davidia involucrata
Duzib084G1067 Durio zibethinus
Duzib248G0641 Durio zibethinus
ECA233G5877 Erigeron canadensis
Eucgr.B00718 Eucalyptus grandis
Eucgr.B03028 Eucalyptus grandis
FAN04G0077 Fragaria x ananassa
FAN07G1587 Fragaria x ananassa
FAN08G0393 Fragaria x ananassa
FAN12G0874 Fragaria x ananassa
FAN13G1808 Fragaria x ananassa
FAN18G0723 Fragaria x ananassa
FAN18G1336 Fragaria x ananassa
FAN22G0059 Fragaria x ananassa
FvH4_5g12320 Fragaria vesca
Glyma.01G082600 Glycine max
Glyma.07G090500 Glycine max
Glyma.09G185400 Glycine max
Gohir.A09G047400 Gossypium hirsutum
Gohir.A09G177600 Gossypium hirsutum
Gohir.A12G168100 Gossypium hirsutum
Gohir.D09G048600 Gossypium hirsutum
Gohir.D09G173100 Gossypium hirsutum
Gohir.D12G171700 Gossypium hirsutum
Gorai.006G061500 Gossypium raimondii
Gorai.006G195000 Gossypium raimondii
Gorai.008G184200 Gossypium raimondii
GSVIVG01008271001 Vitis vinifera
HanXRQChr02g0058721 Helianthus annuus
HPP92_026959 Vanilla planifolia
Hund05757 Selenicereus undatus
Lalb_Chr10g0099931 Lupinus albus
Lj2g0013090 Lotus japonicus
Lj2g0017619 Lotus japonicus
Lsat_1_v5_gn_8_39200 Lactuca sativa
Manes.05G140027 Manihot esculenta
Manes.06G070100 Manihot esculenta
Manes.14G100500 Manihot esculenta
MBI19_g14978_MAGBIO Magnolia biondii
MD06G1214900 Malus domestica
MD13G1043700 Malus domestica
MD14G1225800 Malus domestica
MD16G1044500 Malus domestica
Medtr5g055190 Medicago truncatula
MELO3C011555.2 Cucumis melo
Migut.L01077 Erythranthe guttata
Nitab4.5_0001599g0060 Nicotiana tabacum
Nitab4.5_0001914g0010 Nicotiana tabacum
Nitab4.5_0003285g0040 Nicotiana tabacum
Nitab4.5_0004412g0100 Nicotiana tabacum
Nn3g17803 Nelumbo nucifera
Nn4g23806 Nelumbo nucifera
Oeu008040.1 Olea europaea
Oeu041896.1 Olea europaea
Os09g0408550 Oryza sativa ssp. japonica
Peaxi162Scf00015g00844 Petunia axillaris
PGR102G2516 Punica granatum
PGSC0003DMG400010902 Solanum tuberosum
PGSC0003DMG402005714 Solanum tuberosum
Phvul.003G034700 Phaseolus vulgaris
Phvul.004G158700 Phaseolus vulgaris
Potri.008G119200 Populus trichocarpa
Prupe.1G308800 Prunus persica
Prupe.5G220300 Prunus persica
Psat2g097920 Pisum sativum
Psat6g222560 Pisum sativum
PSO017G5628 Papaver somniferum
QL01p043861 Quercus lobata
QL10p025064 Quercus lobata
RcHm_v2.0_Chr4g0435471 Rosa chinensis
RcHm_v2.0_Chr7g0185241 Rosa chinensis
Rhsim12G0143800 Rhododendron simsii
Sabra08G0090500 Salix brachista
Sc14g0007540 Simmondsia chinensis
Sed0000256 Sechium edule
Sed0021850 Sechium edule
Sed0027931 Sechium edule
Sopen03g038460 Solanum pennellii
Sopen05g012490 Solanum pennellii
Sp2g15090 Schrenkiella parvula
TAR371G1266 Trochodendron aralioides
THA.LOC104824033 Tarenaya hassleriana
Thecc.03G033400 Theobroma cacao
Thhalv10005176m.g Eutrema salsugineum
TPR.G35239 Trifolium pratense
TPR.G38355 Trifolium pratense
TWI15G1195 Tripterygium wilfordii
TWI31G1391 Tripterygium wilfordii
TWI79G0681 Tripterygium wilfordii
VMungo0464G0155 Vigna mungo
Zm00001eb099300 Zea mays

User provided reference genes

Program Settings