Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia07497 Actinidia chinensis
Actinidia18787 Actinidia chinensis
Actinidia35226 Actinidia chinensis
Aqoxy1G02199 Aquilegia oxysepala
Aqoxy4G00493 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea
ATR0602G093 Amborella trichopoda
Atru.chr2.2260 Acer truncatum
AUR62019562 Chenopodium quinoa
AUR62037870 Chenopodium quinoa
CANSAT35G1552 Cannabis sativa
Ca_04016_v3 Cicer arietinum L.
Cc05_g11450 Coffea canephora
Cfa019604 Carpinus fangiana
Ciclev10010617m.g Citrus clementina
CiPaw.11G164300 Carya illinoinensis
CiPaw.12G115300 Carya illinoinensis
ClCG07G009910 Citrullus lanatus
ClCG11G017660 Citrullus lanatus
COL.COLO4_17616 Corchorus olitorius
Cpa.g.sc131.73 Carica papaya
CsaV3_4G008420 Cucumis sativus L.
CsaV3_4G033280 Cucumis sativus L.
CSS0004572 Camellia sinensis var. sinensis
CSS0022090 Camellia sinensis var. sinensis
CSS0026032 Camellia sinensis var. sinensis
DCAR_013141 Daucus carota
DCAR_019586 Daucus carota
DCAR_021012 Daucus carota
DCAR_024487 Daucus carota
Dinv14962 Davidia involucrata
Dinv17387 Davidia involucrata
Dinv18338 Davidia involucrata
Duzib213G0100 Durio zibethinus
Duzib268G0903 Durio zibethinus
ECA234G3938 Erigeron canadensis
ECA236G3415 Erigeron canadensis
Eucgr.F01202 Eucalyptus grandis
FAN11G0448 Fragaria x ananassa
FAN16G1829 Fragaria x ananassa
FAN21G1974 Fragaria x ananassa
FAN25G1303 Fragaria x ananassa
FvH4_3g18750 Fragaria vesca
Glyma.06G232600 Glycine max
Glyma.06G232800 Glycine max
Glyma.12G228100 Glycine max
Glyma.13G271900 Glycine max
Gohir.A01G059000 Gossypium hirsutum
Gohir.A08G021700 Gossypium hirsutum
Gohir.A13G148200 Gossypium hirsutum
Gohir.D01G045100 Gossypium hirsutum
Gohir.D08G032500 Gossypium hirsutum
Gorai.002G064700 Gossypium raimondii
Gorai.004G029900 Gossypium raimondii
GSVIVG01014239001 Vitis vinifera
GSVIVG01021165001 Vitis vinifera
HanXRQChr10g0304731 Helianthus annuus
HanXRQChr12g0372831 Helianthus annuus
HanXRQChr17g0545011 Helianthus annuus
Haze_09360 Corylus avellana
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla
Lalb_Chr25g0286021 Lupinus albus
Lj3g0024128 Lotus japonicus
Lj8A152T79 Lonicera japonica
Lsat_1_v5_gn_5_129201 Lactuca sativa
Lsat_1_v5_gn_7_103061 Lactuca sativa
Manes.03G103501 Manihot esculenta
MBI07_g17039_MAGBIO Magnolia biondii
MD03G1238800 Malus domestica
MD11G1258600 Malus domestica
Medtr2g078220 Medicago truncatula
MELO3C016090.2 Cucumis melo
MELO3C025628.2 Cucumis melo
Migut.H01972 Erythranthe guttata
Migut.M00751 Erythranthe guttata
MSTRG.14216 Avicennia marina
MSTRG.14950 Avicennia marina
Nitab4.5_0000246g0110 Nicotiana tabacum
Nitab4.5_0003077g0030 Nicotiana tabacum
Nitab4.5_0003202g0040 Nicotiana tabacum
Nitab4.5_0005445g0040 Nicotiana tabacum
Nn1g04330 Nelumbo nucifera
Nn1g09023 Nelumbo nucifera
Oeu005394.1 Olea europaea
Oeu051102.1 Olea europaea
Oeu059277.1 Olea europaea
Oeu061338.1 Olea europaea
Peaxi162Scf00000g02515 Petunia axillaris
Peaxi162Scf00069g01930 Petunia axillaris
PGR083G1480 Punica granatum
PGSC0003DMG400012397 Solanum tuberosum
PGSC0003DMG400015376 Solanum tuberosum
PGSC0003DMG400021273 Solanum tuberosum
Phvul.005G068000 Phaseolus vulgaris
Phvul.011G157100 Phaseolus vulgaris
Potri.001G375600 Populus trichocarpa
Prupe.4G171200 Prunus persica
Psat5g240600 Pisum sativum
PSO541G5705 Papaver somniferum
PSO675G6909 Papaver somniferum
QL08p027367 Quercus lobata
RcHm_v2.0_Chr5g0031561 Rosa chinensis
Rhsim04G0024000 Rhododendron simsii
Rhsim06G0204700 Rhododendron simsii
Sabra16G0247400 Salix brachista
SalBow7G2198 Salvia bowleyana
SalBow7G3373 Salvia bowleyana
SalBow8G2605 Salvia bowleyana
Sc03g0010360 Simmondsia chinensis
Sed0005720 Sechium edule
Sed0015488 Sechium edule
Sed0026435 Sechium edule
SGA_v2.0_scaffold130G34335 Striga asiatica
SGA_v2.0_scaffold34G13768 Striga asiatica
SGA_v2.0_scaffold73G24208 Striga asiatica
Solyc07g062685.2 Solanum lycopersicum
Solyc12g014120.3 Solanum lycopersicum
Sopen07g030920 Solanum pennellii
Sopen12g005900 Solanum pennellii
TAR629G1657 Trochodendron aralioides
Thecc.07G103600 Theobroma cacao
TPR.G9213 Trifolium pratense
TWI38G0440 Tripterygium wilfordii
TWI39G0145 Tripterygium wilfordii
VMungo1080G1877 Vigna mungo
VMungo1127G1756 Vigna mungo

User provided reference genes

Program Settings