Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G13170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis
Actinidia32997 Actinidia chinensis
Ah.06g191390 Amaranthus hybridus
AL3G12080 Arabidopsis lyrata
Aqoxy3G04351 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea
AT3G02690 Arabidopsis thaliana
ATR0122G016 Amborella trichopoda
ATR0124G053 Amborella trichopoda
Atru.chr1.2189 Acer truncatum
AUR62035547 Chenopodium quinoa
AUR62037537 Chenopodium quinoa
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus
BolC1t05884H Brassica oleracea
BraA01t04624Z Brassica rapa
BraA02t04668Z Brassica rapa
CAN.G304.9 Capsicum annuum
CANSAT78G2105 Cannabis sativa
CARHR076690 Cardamine hirsuta
Carub.0003s0179 Capsella rubella
Ca_15100_v3 Cicer arietinum L.
Ca_29260_v3 Cicer arietinum L.
CBR_g22386 Chara braunii
Cc07_g12610 Coffea canephora
CDE04G1404 Ceratophyllum demersum
Cfa008019 Carpinus fangiana
Ciclev10011871m.g Citrus clementina
CiPaw.03G009900 Carya illinoinensis
ClCG01G008400 Citrullus lanatus
COL.COLO4_13439 Corchorus olitorius
Cpa.g.c43318 Carica papaya
Cpa.g.sc108.21 Carica papaya
Cre12.g507950 Chlamydomonas reinhardtii
CsaV3_5G024350 Cucumis sativus L.
CSS0044834 Camellia sinensis var. sinensis
DCAR_003391 Daucus carota
Dinv19095 Davidia involucrata
Duzib138G0961 Durio zibethinus
ECA232G1605 Erigeron canadensis
EL10Ac1g01448 Beta vulgaris
EL10Ac4g08870 Beta vulgaris
Eucgr.J01650 Eucalyptus grandis
FAN04G1807 Fragaria x ananassa
FAN08G3450 Fragaria x ananassa
FAN18G3652 Fragaria x ananassa
FvH4_5g39720 Fragaria vesca
Glyma.11G202900 Glycine max
Glyma.18G047900 Glycine max
Gohir.A12G053200 Gossypium hirsutum
Gohir.D12G051700 Gossypium hirsutum
Gorai.008G055000 Gossypium raimondii
GSVIVG01033198001 Vitis vinifera
HanXRQChr15g0486461 Helianthus annuus
Haze_14041 Corylus avellana
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla
HPP92_022205 Vanilla planifolia
Hund22221 Selenicereus undatus
Lalb_Chr18g0053941 Lupinus albus
Lj4A249G56 Lonicera japonica
Lj6g0001971 Lotus japonicus
Lsat_1_v5_gn_8_114940 Lactuca sativa
Manes.01G125800 Manihot esculenta
Mapoly0068s0059 Marchantia polymorpha
MBI06_g37978_MAGBIO Magnolia biondii
MCO16G393 Micromonas commoda
MD09G1187600 Malus domestica
Medtr3g063240 Medicago truncatula
Medtr3g063250 Medicago truncatula
MELO3C025108.2 Cucumis melo
MELO3C034855.2 Cucumis melo
Migut.K01201 Erythranthe guttata
MSTRG.15618 Avicennia marina
Nitab4.5_0002297g0090 Nicotiana tabacum
Nitab4.5_0008083g0020 Nicotiana tabacum
Nn4g25028 Nelumbo nucifera
Oeu058858.1 Olea europaea
Os10g0493900 Oryza sativa ssp. japonica
Peaxi162Scf00784g00028 Petunia axillaris
PGR042G1876 Punica granatum
PGSC0003DMG400021455 Solanum tuberosum
Phvul.006G083500 Phaseolus vulgaris
Potri.012G145300 Populus trichocarpa
Pp3c19_6070 Physcomitrium patens
Pp3c7_24690 Physcomitrium patens
Pp3s46_100 Physcomitrium patens
PRCOL_00000403 Prasinoderma coloniale
Prupe.8G267800 Prunus persica
Psat0s2701g0160 Pisum sativum
Psat4g208440 Pisum sativum
Psat4g208480 Pisum sativum
Psat4g208520 Pisum sativum
Psat5g144680 Pisum sativum
Psat5g144720 Pisum sativum
Psat5g203840 Pisum sativum
Psat7g173760 Pisum sativum
PSO063G5766 Papaver somniferum
QL02p055508 Quercus lobata
QL02p056562 Quercus lobata
QL05p028777 Quercus lobata
RcHm_v2.0_Chr7g0242021 Rosa chinensis
Rhsim10G0186700 Rhododendron simsii
Sabra12G0109100 Salix brachista
SalBow5G0256 Salvia bowleyana
Sc09g0004650 Simmondsia chinensis
Sed0008277 Sechium edule
SEGI_11411 Sequoiadendron giganteum
SEGI_16808 Sequoiadendron giganteum
SGA_v2.0_scaffold199G41251 Striga asiatica
SMO364G0667 Selaginella moellendorffii
Solyc02g036470.4 Solanum lycopersicum
Sopen02g011830 Solanum pennellii
Sp3g01720 Schrenkiella parvula
TAR371G0041 Trochodendron aralioides
THA.LOC104820927 Tarenaya hassleriana
Thecc.04G056600 Theobroma cacao
Thhalv10020801m.g Eutrema salsugineum
TPR.G14061 Trifolium pratense
TPR.G37386 Trifolium pratense
TWI74G1645 Tripterygium wilfordii
unitig_748.g7253 Utricularia gibba
vmacro20444 Vaccinium macrocarpon
VMungo0540G0919 Vigna mungo
Zm00001eb044830 Zea mays

User provided reference genes

Program Settings