Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27130 Brassica napus
Aa31LG5G130 Aethionema arabicum
Actinidia12183 Actinidia chinensis
Actinidia27577 Actinidia chinensis
Ah.05g173810 Amaranthus hybridus
AL6G53450 Arabidopsis lyrata
Aqoxy7G00755 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1V3LDQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W52PF9 Arachis hypogaea
AT4G00060 Arabidopsis thaliana
ATR0317G095 Amborella trichopoda
Atru.chr5.236 Acer truncatum
Atru.chr5.237 Acer truncatum
AUR62004162 Chenopodium quinoa
AUR62013660 Chenopodium quinoa
BcaB01g02181 Brassica carinata
BcaC01g04890 Brassica carinata
BcaC01g06887 Brassica carinata
BolC3t15598H Brassica oleracea
BolC3t16200H Brassica oleracea
BraA03t11926Z Brassica rapa
C03p32590 Brassica napus
C03p39290 Brassica napus
CAN.G1872.3 Capsicum annuum
CANSAT56G2478 Cannabis sativa
CARHR248110 Cardamine hirsuta
Carub.0006s3716 Capsella rubella
Ca_19854_v3 Cicer arietinum L.
Cc02_g24460 Coffea canephora
Cfa011148 Carpinus fangiana
Cfa011150 Carpinus fangiana
Cfa011153 Carpinus fangiana
Cfa011155 Carpinus fangiana
Cfa011156 Carpinus fangiana
Ciclev10018476m.g Citrus clementina
CiPaw.14G025500 Carya illinoinensis
ClCG05G000200 Citrullus lanatus
COL.COLO4_12485 Corchorus olitorius
Cpa.g.sc49.145 Carica papaya
Cpa.g.sc49.147 Carica papaya
CsaV3_3G007350 Cucumis sativus L.
CSS0002341 Camellia sinensis var. sinensis
DCAR_015878 Daucus carota
DCAR_015879 Daucus carota
Dinv43669 Davidia involucrata
Duzib138G0330 Durio zibethinus
ECA240G4781 Erigeron canadensis
EL10Ac1g00837 Beta vulgaris
Eucgr.D02494 Eucalyptus grandis
FAN01G2786 Fragaria x ananassa
FAN03G1880 Fragaria x ananassa
FAN06G2175 Fragaria x ananassa
FAN06G2296 Fragaria x ananassa
FAN10G3138 Fragaria x ananassa
FAN10G3898 Fragaria x ananassa
FvH4_7g11041 Fragaria vesca
Glyma.01G135400 Glycine max
Glyma.03G032900 Glycine max
Gohir.A11G078500 Gossypium hirsutum
Gohir.D11G083100 Gossypium hirsutum
Gorai.007G088700 Gossypium raimondii
GSVIVG01018154001 Vitis vinifera
HanXRQChr03g0093281 Helianthus annuus
Haze_02708 Corylus avellana
Haze_02710 Corylus avellana
Hma1.2p1_0041F.1_g025280 Hydrangea macrophylla
Hma1.2p1_0072F.1_g038360 Hydrangea macrophylla
Hma1.2p1_0072F.1_g038370 Hydrangea macrophylla
Hma1.2p1_0072F.1_g038380 Hydrangea macrophylla
HPP92_005330 Vanilla planifolia
Hund27378 Selenicereus undatus
Lalb_Chr07g0190291 Lupinus albus
Lj3g0012088 Lotus japonicus
Lj7A537G47 Lonicera japonica
Lj7P537G26 Lonicera japonica
Lsat_1_v5_gn_3_129280 Lactuca sativa
Manes.05G049400 Manihot esculenta
Mapoly0072s0019 Marchantia polymorpha
MD07G1115100 Malus domestica
Medtr4g027425 Medicago truncatula
MELO3C005957.2 Cucumis melo
Migut.N01612 Erythranthe guttata
MSTRG.28175 Avicennia marina
Nitab4.5_0000859g0180 Nicotiana tabacum
Nitab4.5_0011151g0030 Nicotiana tabacum
Nn1g00999 Nelumbo nucifera
Oeu005825.4 Olea europaea
Oeu032185.2 Olea europaea
Os06g0669275 Oryza sativa ssp. japonica
Peaxi162Scf00803g00223 Petunia axillaris
PGR004G2833 Punica granatum
PGSC0003DMG401026018 Solanum tuberosum
Phvul.010G071766 Phaseolus vulgaris
Phvul.010G071832 Phaseolus vulgaris
Potri.014G066000 Populus trichocarpa
Pp3c16_11310 Physcomitrium patens
Prupe.2G137200 Prunus persica
Psat0s3685g0040 Pisum sativum
PSO017G2680 Papaver somniferum
PSO170G5751 Papaver somniferum
QL04p037175 Quercus lobata
QL93p0363_0004 Quercus lobata
RcHm_v2.0_Chr1g0316831 Rosa chinensis
RcHm_v2.0_Chr1g0349071 Rosa chinensis
RcHm_v2.0_Chr2g0167831 Rosa chinensis
RcHm_v2.0_Chr5g0049321 Rosa chinensis
RcHm_v2.0_Chr7g0229001 Rosa chinensis
Rhsim07G0031600 Rhododendron simsii
Sabra14G0046000 Salix brachista
Sc02g0002820 Simmondsia chinensis
Sed0013724 Sechium edule
SEGI_10795 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05526 Striga asiatica
Solyc01g090860.3 Solanum lycopersicum
Sopen01g036600 Solanum pennellii
Sp6g00130 Schrenkiella parvula
TAR375G0254 Trochodendron aralioides
THA.LOC104801481 Tarenaya hassleriana
Thecc.01G384200 Theobroma cacao
Thhalv10028362m.g Eutrema salsugineum
TPR.G4985 Trifolium pratense
TWI59G0915 Tripterygium wilfordii
unitig_748.g7113 Utricularia gibba
vmacro13446 Vaccinium macrocarpon
vmacro22440 Vaccinium macrocarpon
VMungo0331G0964 Vigna mungo
VMungo0331G1545 Vigna mungo
VMungo0540G0840 Vigna mungo
Zm00001eb274180 Zea mays

User provided reference genes

Program Settings