Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11120 Brassica napus
A08p14200 Brassica napus
Aa31LG3G3710 Aethionema arabicum
Aa31LG6G1850 Aethionema arabicum
Aa31sc19G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis
Actinidia01257 Actinidia chinensis
Actinidia14735 Actinidia chinensis
Actinidia18166 Actinidia chinensis
Actinidia32783 Actinidia chinensis
Ah.12g058500 Amaranthus hybridus
AL7G34930 Arabidopsis lyrata
AT4G19160 Arabidopsis thaliana
ATR0568G039 Amborella trichopoda
Atru.chr8.2640 Acer truncatum
AUR62010477 Chenopodium quinoa
AUR62030416 Chenopodium quinoa
BcaB04g18531 Brassica carinata
BcaC01g00601 Brassica carinata
BcaC09g51434 Brassica carinata
BcaNung04007 Brassica carinata
BolC1t01289H Brassica oleracea
BolC3t20457H Brassica oleracea
BraA01t01058Z Brassica rapa
BraA08t33414Z Brassica rapa
C01p13160 Brassica napus
C03p81800 Brassica napus
CAN.G1026.8 Capsicum annuum
CAN.G884.14 Capsicum annuum
CAN.G884.9 Capsicum annuum
CAN.G947.35 Capsicum annuum
CARHR226030 Cardamine hirsuta
Carub.0007s2199 Capsella rubella
Cc08_g05440 Coffea canephora
CDE01G0744 Ceratophyllum demersum
COL.COLO4_10360 Corchorus olitorius
Cpa.g.sc71.63 Carica papaya
Cre14.g621850 Chlamydomonas reinhardtii
CSS0030969 Camellia sinensis var. sinensis
CSS0046796 Camellia sinensis var. sinensis
DCAR_028369 Daucus carota
Dinv37422 Davidia involucrata
Dinv41811 Davidia involucrata
Duzib068G0239 Durio zibethinus
Duzib205G1615 Durio zibethinus
ECA240G1264 Erigeron canadensis
ECA246G0847 Erigeron canadensis
EL10Ac5g12579 Beta vulgaris
Eucgr.D02550 Eucalyptus grandis
Eucgr.D02551 Eucalyptus grandis
FAN15G0890 Fragaria x ananassa
FAN20G1855 Fragaria x ananassa
FAN27G0800 Fragaria x ananassa
FAN27G2650 Fragaria x ananassa
FvH4_2g37180 Fragaria vesca
FvH4_2g37220 Fragaria vesca
Gohir.A08G150000 Gossypium hirsutum
Gohir.A12G202400 Gossypium hirsutum
Gohir.D08G171101 Gossypium hirsutum
Gohir.D12G205100 Gossypium hirsutum
Gorai.004G178500 Gossypium raimondii
Gorai.008G220000 Gossypium raimondii
GSVIVG01036872001 Vitis vinifera
HanXRQChr03g0081041 Helianthus annuus
HanXRQChr05g0158621 Helianthus annuus
HanXRQChr09g0271561 Helianthus annuus
HanXRQChr11g0344761 Helianthus annuus
HanXRQChr11g0344831 Helianthus annuus
HanXRQChr13g0411151 Helianthus annuus
HanXRQChr17g0537231 Helianthus annuus
Hund11040 Selenicereus undatus
Lj8A337G13 Lonicera japonica
Lsat_1_v5_gn_3_19721 Lactuca sativa
Lsat_1_v5_gn_5_57121 Lactuca sativa
Manes.15G184300 Manihot esculenta
Manes.17G016300 Manihot esculenta
MBI15_g33454_MAGBIO Magnolia biondii
Migut.A00537 Erythranthe guttata
MSTRG.13909 Avicennia marina
MSTRG.1762 Avicennia marina
Nitab4.5_0000030g0370 Nicotiana tabacum
Nitab4.5_0000898g0120 Nicotiana tabacum
Nitab4.5_0000985g0060 Nicotiana tabacum
Nitab4.5_0001175g0140 Nicotiana tabacum
Nitab4.5_0011712g0010 Nicotiana tabacum
Nn1g09368 Nelumbo nucifera
Nn7g37397 Nelumbo nucifera
Oeu015533.1 Olea europaea
Oeu042191.1 Olea europaea
Oeu042192.1 Olea europaea
Oeu042198.1 Olea europaea
Oeu046790.1 Olea europaea
Oeu057164.1 Olea europaea
Peaxi162Scf00045g00071 Petunia axillaris
Peaxi162Scf00053g00062 Petunia axillaris
Peaxi162Scf00527g00718 Petunia axillaris
Peaxi162Scf00876g00435 Petunia axillaris
PGR031G3371 Punica granatum
PGSC0003DMG400016110 Solanum tuberosum
PGSC0003DMG400018483 Solanum tuberosum
Potri.001G193400 Populus trichocarpa
Potri.003G033300 Populus trichocarpa
Pp3c12_14620 Physcomitrium patens
Pp3c4_2130 Physcomitrium patens
Prupe.1G352900 Prunus persica
PSO541G2197 Papaver somniferum
PSO675G7908 Papaver somniferum
RcHm_v2.0_Chr4g0402301 Rosa chinensis
RcHm_v2.0_Chr6g0304491 Rosa chinensis
Rhsim11G0034900 Rhododendron simsii
Rhsim11G0035500 Rhododendron simsii
Rhsim11G0035700 Rhododendron simsii
Sabra01G0135500 Salix brachista
Sabra03G0019100 Salix brachista
SalBow4G1396 Salvia bowleyana
SalBow8G2199 Salvia bowleyana
SEGI_14227 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31352 Striga asiatica
SMO364G0549 Selaginella moellendorffii
Solyc08g005560.3 Solanum lycopersicum
Solyc08g075520.4 Solanum lycopersicum
Sopen08g001580 Solanum pennellii
Sopen08g024170 Solanum pennellii
Sp7g17860 Schrenkiella parvula
TAR629G3250 Trochodendron aralioides
THA.LOC104811082 Tarenaya hassleriana
Thecc.03G318000 Theobroma cacao
Thhalv10025127m.g Eutrema salsugineum
unitig_37.g12121 Utricularia gibba
vmacro00080 Vaccinium macrocarpon

User provided reference genes

Program Settings