Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p27260 Brassica napus
Aa31LG3G16830 Aethionema arabicum
Aa31LG7G15400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis
Actinidia28243 Actinidia chinensis
Actinidia28854 Actinidia chinensis
Ah.02g123840 Amaranthus hybridus
AL6G20820 Arabidopsis lyrata
Aqoxy6G00746 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea
AT4G13577 Arabidopsis thaliana
AT5G10320 Arabidopsis thaliana
ATR0684G225 Amborella trichopoda
Atru.chr3.1373 Acer truncatum
AUR62001986 Chenopodium quinoa
AUR62003818 Chenopodium quinoa
BcaB02g08416 Brassica carinata
BcaB08g37116 Brassica carinata
BcaC04g19312 Brassica carinata
BcaC04g19315 Brassica carinata
BolC9t59480H Brassica oleracea
BraA10t44776Z Brassica rapa
C09p67070 Brassica napus
CAN.G905.37 Capsicum annuum
CANSAT01G2346 Cannabis sativa
CARHR202960 Cardamine hirsuta
CARHR202970 Cardamine hirsuta
CARHR202980 Cardamine hirsuta
Carub.0006s0878 Capsella rubella
Carub.0006s0879 Capsella rubella
Ca_16518_v3 Cicer arietinum L.
CBR_g26374 Chara braunii
CBR_g53530 Chara braunii
Cc03_g11790 Coffea canephora
Cc07_g14840 Coffea canephora
CDE06G0254 Ceratophyllum demersum
Cfa002624 Carpinus fangiana
Ciclev10026196m.g Citrus clementina
CiPaw.03G143900 Carya illinoinensis
ClCG07G017370 Citrullus lanatus
COL.COLO4_27275 Corchorus olitorius
Cpa.g.sc55.89 Carica papaya
Cre17.g719050 Chlamydomonas reinhardtii
CsaV3_4G004600 Cucumis sativus L.
CsaV3_UNG122970 Cucumis sativus L.
CsaV3_UNG124970 Cucumis sativus L.
CsaV3_UNG160180 Cucumis sativus L.
CsaV3_UNG160190 Cucumis sativus L.
CsaV3_UNG223570 Cucumis sativus L.
CSS0046442 Camellia sinensis var. sinensis
DCAR_014211 Daucus carota
Dinv08841 Davidia involucrata
Duzib187G1253 Durio zibethinus
ECA246G2908 Erigeron canadensis
EL10Ac6g15136 Beta vulgaris
Eucgr.H04751 Eucalyptus grandis
FAN19G2919 Fragaria x ananassa
FAN23G0863 Fragaria x ananassa
FAN28G1526 Fragaria x ananassa
FvH4_1g20510 Fragaria vesca
Glyma.11G241200 Glycine max
Glyma.18G015800 Glycine max
Gohir.A10G085100 Gossypium hirsutum
Gohir.D10G103800 Gossypium hirsutum
Gohir.D10G103900 Gossypium hirsutum
Gorai.011G113400 Gossypium raimondii
GSVIVG01006632001 Vitis vinifera
HanXRQChr02g0032001 Helianthus annuus
HanXRQChr02g0032011 Helianthus annuus
HanXRQChr15g0477621 Helianthus annuus
Haze_24873 Corylus avellana
Haze_24882 Corylus avellana
HPP92_011214 Vanilla planifolia
Hund13600 Selenicereus undatus
Lalb_Chr19g0127391 Lupinus albus
Lj6g0005810 Lotus japonicus
Lsat_1_v5_gn_5_34320 Lactuca sativa
Manes.13G095500 Manihot esculenta
Mapoly0077s0016 Marchantia polymorpha
MBI02_g02177_MAGBIO Magnolia biondii
MD01G1033500 Malus domestica
Medtr3g087010 Medicago truncatula
MELO3C017606.2 Cucumis melo
Migut.H02345 Erythranthe guttata
MSTRG.23356 Avicennia marina
Nitab4.5_0000743g0130 Nicotiana tabacum
Nitab4.5_0004570g0020 Nicotiana tabacum
Nitab4.5_0004570g0030 Nicotiana tabacum
Nn1g05418 Nelumbo nucifera
Oeu033049.1 Olea europaea
Os04g0451100 Oryza sativa ssp. japonica
Peaxi162Scf00381g01013 Petunia axillaris
PGSC0003DMG400016160 Solanum tuberosum
Phvul.001G253200 Phaseolus vulgaris
Potri.005G073600 Populus trichocarpa
Pp3c26_3770 Physcomitrium patens
Pp3c3_14090 Physcomitrium patens
Prupe.6G191000 Prunus persica
Psat5g090600 Pisum sativum
PSO210G0897 Papaver somniferum
PSO447G0355 Papaver somniferum
QL06p048476 Quercus lobata
QL06p048506 Quercus lobata
QL06p048511 Quercus lobata
RcHm_v2.0_Chr2g0112761 Rosa chinensis
RcHm_v2.0_Chr4g0406191 Rosa chinensis
Rhsim08G0012600 Rhododendron simsii
Sabra05G0060100 Salix brachista
SalBow3G4176 Salvia bowleyana
Sc16g0000180 Simmondsia chinensis
Sed0027583 Sechium edule
SEGI_01830 Sequoiadendron giganteum
SEGI_02986 Sequoiadendron giganteum
SEGI_16292 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31503 Striga asiatica
SMO301G0024 Selaginella moellendorffii
Solyc11g009060.2 Solanum lycopersicum
Sopen11g004830 Solanum pennellii
Sp1g28000 Schrenkiella parvula
Sp6g33110 Schrenkiella parvula
TAR625G1553 Trochodendron aralioides
Thecc.01G097900 Theobroma cacao
Thhalv10013818m.g Eutrema salsugineum
TPR.G15994 Trifolium pratense
TWI53G1189 Tripterygium wilfordii
unitig_899.g14550 Utricularia gibba
vmacro18587 Vaccinium macrocarpon
VMungo1383G2853 Vigna mungo
Zm00001eb081250 Zea mays

User provided reference genes

Program Settings