Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G11210 Aethionema arabicum
Actinidia07911 Actinidia chinensis
Ah.08g214300 Amaranthus hybridus
AL3G32650 Arabidopsis lyrata
AL3G32730 Arabidopsis lyrata
Aqoxy5G00911 Aquilegia oxysepala
Aqoxy7G03769 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0XGZ0U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GRDF7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M49645 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UU4A42 Arachis hypogaea
AT3G19250 Arabidopsis thaliana
AT3G19330 Arabidopsis thaliana
ATR0605G086 Amborella trichopoda
ATR0605G219 Amborella trichopoda
Atru.BG.47.p Acer truncatum
AUR62018117 Chenopodium quinoa
AUR62034448 Chenopodium quinoa
BcaNung05593 Brassica carinata
CAN.G574.51 Capsicum annuum
CANSAT64G0899 Cannabis sativa
CARHR074890 Cardamine hirsuta
CARHR094730 Cardamine hirsuta
Carub.0003s1908 Capsella rubella
Carub.0003s1916 Capsella rubella
Ca_08206_v3 Cicer arietinum L.
Cc06_g06290 Coffea canephora
Cfa007147 Carpinus fangiana
Ciclev10015537m.g Citrus clementina
Ciclev10015613m.g Citrus clementina
CiPaw.03G001000 Carya illinoinensis
ClCG05G012570 Citrullus lanatus
COL.COLO4_13389 Corchorus olitorius
Cpa.g.sc70.53 Carica papaya
CsaV3_3G027820 Cucumis sativus L.
CSS0023423 Camellia sinensis var. sinensis
CSS0025315 Camellia sinensis var. sinensis
DCAR_020730 Daucus carota
Dinv21152 Davidia involucrata
Dinv31731 Davidia involucrata
Duzib187G1577 Durio zibethinus
Duzib264G0453 Durio zibethinus
ECA248G1522 Erigeron canadensis
EL10Ac2g03021 Beta vulgaris
Eucgr.I01580 Eucalyptus grandis
Eucgr.I01581 Eucalyptus grandis
Eucgr.I01582 Eucalyptus grandis
Eucgr.I01589 Eucalyptus grandis
Eucgr.I01590 Eucalyptus grandis
FAN02G4330 Fragaria x ananassa
FAN05G2532 Fragaria x ananassa
FAN09G4647 Fragaria x ananassa
FAN14G5767 Fragaria x ananassa
FvH4_6g54380 Fragaria vesca
Glyma.16G047200 Glycine max
Glyma.16G148000 Glycine max
Glyma.19G104500 Glycine max
Gohir.A04G050500 Gossypium hirsutum
Gohir.A10G069800 Gossypium hirsutum
Gohir.D05G330200 Gossypium hirsutum
Gohir.D10G081632 Gossypium hirsutum
Gorai.009G354000 Gossypium raimondii
Gorai.011G088600 Gossypium raimondii
GSVIVG01013475001 Vitis vinifera
HanXRQChr01g0025271 Helianthus annuus
Haze_14972 Corylus avellana
Hma1.2p1_0769F.1_g215650 Hydrangea macrophylla
Hma1.2p1_1724F.1_g299410 Hydrangea macrophylla
HPP92_007453 Vanilla planifolia
HPP92_027663 Vanilla planifolia
Hund15581 Selenicereus undatus
Lalb_Chr03g0039431 Lupinus albus
Lalb_Chr21g0316961 Lupinus albus
Lalb_Chr22g0359711 Lupinus albus
Lalb_Chr22g0359721 Lupinus albus
Lj1g0021601 Lotus japonicus
Lj2g0027079 Lotus japonicus
Lj2P145T32 Lonicera japonica
Lsat_1_v5_gn_1_58000 Lactuca sativa
Manes.04G094000 Manihot esculenta
Manes.11G075800 Manihot esculenta
MBI01_g32842_MAGBIO Magnolia biondii
MD09G1002000 Malus domestica
Medtr7g084240 Medicago truncatula
MELO3C014773.2 Cucumis melo
Migut.J00667 Erythranthe guttata
Migut.L01810 Erythranthe guttata
MSTRG.19286 Avicennia marina
Nitab4.5_0000757g0010 Nicotiana tabacum
Nitab4.5_0000757g0020 Nicotiana tabacum
Nitab4.5_0003905g0010 Nicotiana tabacum
Nitab4.5_0005820g0050 Nicotiana tabacum
Nn6g31519 Nelumbo nucifera
Oeu011612.1 Olea europaea
Os04g0405700 Oryza sativa ssp. japonica
Peaxi162Scf00013g00201 Petunia axillaris
Peaxi162Scf00013g00202 Petunia axillaris
Peaxi162Scf00013g00219 Petunia axillaris
PGR142G1414 Punica granatum
PGR142G2651 Punica granatum
PGSC0003DMG400032120 Solanum tuberosum
Phvul.001G083200 Phaseolus vulgaris
Phvul.004G069400 Phaseolus vulgaris
Potri.010G240200 Populus trichocarpa
Prupe.3G314200 Prunus persica
Psat3g092280 Pisum sativum
PSO017G1602 Papaver somniferum
PSO170G6313 Papaver somniferum
QL02p069213 Quercus lobata
QL02p069227 Quercus lobata
RcHm_v2.0_Chr2g0176601 Rosa chinensis
Rhsim04G0129800 Rhododendron simsii
Sabra10G0188000 Salix brachista
SalBow5G3715 Salvia bowleyana
Sc10g0003370 Simmondsia chinensis
Sed0019129 Sechium edule
SGA_v2.0_scaffold31G12881 Striga asiatica
Solyc01g005480.3 Solanum lycopersicum
Sopen01g001490 Solanum pennellii
Sp3g00050 Schrenkiella parvula
THA.LOC104821141 Tarenaya hassleriana
Thecc.04G049100 Theobroma cacao
Thhalv10021033m.g Eutrema salsugineum
TPR.G15408 Trifolium pratense
TWI32G1122 Tripterygium wilfordii
unitig_578.g15820 Utricularia gibba
vmacro08844 Vaccinium macrocarpon
VMungo0464G0459 Vigna mungo
VMungo1383G1845 Vigna mungo
Zm00001eb421730 Zea mays

User provided reference genes

Program Settings