Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10140 Brassica napus
A03p14540 Brassica napus
A10p11820 Brassica napus
Aa31LG3G10550 Aethionema arabicum
Actinidia10699 Actinidia chinensis
Actinidia35309 Actinidia chinensis
Ah.16g106570 Amaranthus hybridus
AL8G30060 Arabidopsis lyrata
Aqoxy1G03827 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KVK1VL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WIG9V3 Arachis hypogaea
AT5G54600 Arabidopsis thaliana
ATR1088G047 Amborella trichopoda
Atru.chr2.3143 Acer truncatum
AUR62029246 Chenopodium quinoa
AUR62034219 Chenopodium quinoa
BcaB05g22149 Brassica carinata
BcaB08g35821 Brassica carinata
BcaC01g06269 Brassica carinata
BcaC03g14300 Brassica carinata
BcaC04g20323 Brassica carinata
BolC2t07786H Brassica oleracea
BolC3t14111H Brassica oleracea
BolC3t14160H Brassica oleracea
BolC9t57371H Brassica oleracea
BraA02t06085Z Brassica rapa
BraA10t43280Z Brassica rapa
C02p16840 Brassica napus
C03p16990 Brassica napus
C03p17460 Brassica napus
C09p44940 Brassica napus
CAN.G1110.18 Capsicum annuum
CANSAT11G1866 Cannabis sativa
CARHR267890 Cardamine hirsuta
Carub.0008s1487 Capsella rubella
Ca_01774_v3 Cicer arietinum L.
CBR_g8903 Chara braunii
Cc05_g13100 Coffea canephora
CDE02G2884 Ceratophyllum demersum
CDE05G2809 Ceratophyllum demersum
Cfa020459 Carpinus fangiana
Ciclev10009584m.g Citrus clementina
CiPaw.11G182300 Carya illinoinensis
ClCG10G006290 Citrullus lanatus
COL.COLO4_09549 Corchorus olitorius
Cpa.g.sc97.91 Carica papaya
Cre16.g652550 Chlamydomonas reinhardtii
DCAR_012725 Daucus carota
Dinv22319 Davidia involucrata
Duzib213G0969 Durio zibethinus
EL10Ac4g07994 Beta vulgaris
Eucgr.F03416 Eucalyptus grandis
FAN11G0194 Fragaria x ananassa
FAN16G1255 Fragaria x ananassa
FAN21G3550 Fragaria x ananassa
FAN25G1510 Fragaria x ananassa
FvH4_3g21600 Fragaria vesca
Glyma.12G215900 Glycine max
Glyma.13G285600 Glycine max
Glyma.19G066350 Glycine max
Gohir.A01G073000 Gossypium hirsutum
Gohir.D01G059600 Gossypium hirsutum
Gorai.002G080800 Gossypium raimondii
GSVIVG01014572001 Vitis vinifera
HanXRQChr03g0076231 Helianthus annuus
Haze_09585 Corylus avellana
Hma1.2p1_1054F.1_g252540 Hydrangea macrophylla
HPP92_013305 Vanilla planifolia
Hund02149 Selenicereus undatus
Lalb_Chr14g0366021 Lupinus albus
Lj1A861T62 Lonicera japonica
Lj3g0006112 Lotus japonicus
Lsat_1_v5_gn_9_94980 Lactuca sativa
Manes.03G121040 Manihot esculenta
Mapoly0006s0262 Marchantia polymorpha
MBI19_g03677_MAGBIO Magnolia biondii
MCO02G437 Micromonas commoda
MD03G1214300 Malus domestica
MD11G1229300 Malus domestica
Medtr2g082320 Medicago truncatula
Medtr2g082410 Medicago truncatula
MELO3C031870.2 Cucumis melo
Migut.H01869 Erythranthe guttata
Migut.H01870 Erythranthe guttata
MSTRG.12948 Avicennia marina
Nitab4.5_0000552g0050 Nicotiana tabacum
Nitab4.5_0002229g0050 Nicotiana tabacum
Nitab4.5_0002342g0150 Nicotiana tabacum
Nitab4.5_0006304g0020 Nicotiana tabacum
Nn1g06934 Nelumbo nucifera
Os06g0683200 Oryza sativa ssp. japonica
Peaxi162Scf01086g00024 Petunia axillaris
PGR031G3561 Punica granatum
PGSC0003DMG400019266 Solanum tuberosum
PGSC0003DMG400025013 Solanum tuberosum
Phvul.005G090100 Phaseolus vulgaris
Potri.001G415400 Populus trichocarpa
Pp3c15_17530 Physcomitrium patens
Pp3c9_9200 Physcomitrium patens
PRCOL_00001762 Prasinoderma coloniale
Prupe.4G200400 Prunus persica
Psat5g249200 Pisum sativum
PSO210G7521 Papaver somniferum
PSO832G4295 Papaver somniferum
QL08p014044 Quercus lobata
RcHm_v2.0_Chr5g0037061 Rosa chinensis
Rhsim02G0093900 Rhododendron simsii
RhsimUnG0254000 Rhododendron simsii
Sabra16G0282000 Salix brachista
SalBow7G2145 Salvia bowleyana
Sc03g0009180 Simmondsia chinensis
Sed0023243 Sechium edule
SEGI_26346 Sequoiadendron giganteum
SGA_v2.0_scaffold9G05013 Striga asiatica
SMO356G0620 Selaginella moellendorffii
Solyc07g063960.3 Solanum lycopersicum
Sopen07g032100 Solanum pennellii
Sp6g16570 Schrenkiella parvula
TAR627G0546 Trochodendron aralioides
THA.LOC104809288 Tarenaya hassleriana
Thecc.07G056100 Theobroma cacao
Thhalv10014723m.g Eutrema salsugineum
TPR.G36823 Trifolium pratense
TWI38G1667 Tripterygium wilfordii
TWI39G1263 Tripterygium wilfordii
unitig_0.g2378 Utricularia gibba
vmacro22727 Vaccinium macrocarpon
vmacro22759 Vaccinium macrocarpon
VMungo1080G1399 Vigna mungo
Zm00001eb225380 Zea mays

User provided reference genes

Program Settings