Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p40780 Brassica napus
Aa31LG5G17970 Aethionema arabicum
Actinidia23366 Actinidia chinensis
Ah.08g218720 Amaranthus hybridus
AL3G18700 Arabidopsis lyrata
Aqoxy2G03964 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23KP9R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZLM6RM Arachis hypogaea
AT3G07400 Arabidopsis thaliana
ATR0609G072 Amborella trichopoda
Atru.chr6.1598 Acer truncatum
AUR62001194 Chenopodium quinoa
AUR62022134 Chenopodium quinoa
AUR62040616 Chenopodium quinoa
BcaC05g29533 Brassica carinata
BcaC05g29730 Brassica carinata
BolC5t34643H Brassica oleracea
BraA05t22809Z Brassica rapa
C05p59890 Brassica napus
CAN.G99.1 Capsicum annuum
CAN.G99.2 Capsicum annuum
CANSAT01G2939 Cannabis sativa
CARHR082040 Cardamine hirsuta
Carub.0003s0694 Capsella rubella
Ca_23191_v3 Cicer arietinum L.
CBR_g37499 Chara braunii
CBR_g54770 Chara braunii
Cc01_g16310 Coffea canephora
Cc08_g04910 Coffea canephora
CDE05G0609 Ceratophyllum demersum
CDE05G1549 Ceratophyllum demersum
CDE05G1763 Ceratophyllum demersum
Cfa010362 Carpinus fangiana
Ciclev10030603m.g Citrus clementina
CiPaw.13G053400 Carya illinoinensis
CiPaw.14G042600 Carya illinoinensis
ClCG09G008430 Citrullus lanatus
COL.COLO4_04501 Corchorus olitorius
Cpa.g.sc8.88 Carica papaya
Cre06.g275150 Chlamydomonas reinhardtii
CsaV3_7G026640 Cucumis sativus L.
CSS0012975 Camellia sinensis var. sinensis
DCAR_004762 Daucus carota
Dinv12805 Davidia involucrata
ECA236G3389 Erigeron canadensis
ECA246G1360 Erigeron canadensis
EL10Ac7g17981 Beta vulgaris
EL10Ac7g17982 Beta vulgaris
Eucgr.H00733 Eucalyptus grandis
Eucgr.H00736 Eucalyptus grandis
FAN15G2626 Fragaria x ananassa
FAN24G1597 Fragaria x ananassa
FAN27G2037 Fragaria x ananassa
FvH4_2g17990 Fragaria vesca
Glyma.03G089000 Glycine max
Glyma.16G084200 Glycine max
Gohir.A07G090700 Gossypium hirsutum
Gohir.A11G141600 Gossypium hirsutum
Gohir.D07G095400 Gossypium hirsutum
Gohir.D11G147900 Gossypium hirsutum
Gorai.001G102700 Gossypium raimondii
Gorai.007G158500 Gossypium raimondii
GSVIVG01002194001 Vitis vinifera
GSVIVG01005280001 Vitis vinifera
HanXRQChr04g0107951 Helianthus annuus
Haze_03313 Corylus avellana
Haze_03314 Corylus avellana
Hma1.2p1_0405F.1_g145830 Hydrangea macrophylla
Hma1.2p1_0405F.1_g145840 Hydrangea macrophylla
Hma1.2p1_2027F.1_g311640 Hydrangea macrophylla
Hma1.2p1_2126F.1_g314575 Hydrangea macrophylla
Hma1.2p1_2126F.1_g314577 Hydrangea macrophylla
HPP92_009934 Vanilla planifolia
Hund18485 Selenicereus undatus
Lalb_Chr13g0291021 Lupinus albus
Lj2C1118G19 Lonicera japonica
Lj3g0004892 Lotus japonicus
Lsat_1_v5_gn_8_88561 Lactuca sativa
Manes.12G052100 Manihot esculenta
Mapoly0057s0040 Marchantia polymorpha
MBI07_g21346_MAGBIO Magnolia biondii
MBI16_g37173_MAGBIO Magnolia biondii
MCO04G344 Micromonas commoda
MD05G1163900 Malus domestica
MD10G1153600 Malus domestica
Medtr7g057260 Medicago truncatula
Medtr8g011610 Medicago truncatula
MELO3C021115.2 Cucumis melo
Migut.N00655 Erythranthe guttata
MSTRG.17976 Avicennia marina
Nitab4.5_0000038g0010 Nicotiana tabacum
Nitab4.5_0009574g0010 Nicotiana tabacum
Nn1g08059 Nelumbo nucifera
Oeu003643.1 Olea europaea
Os02g0481700 Oryza sativa ssp. japonica
Peaxi162Scf00054g00172 Petunia axillaris
PGR083G0226 Punica granatum
Phvul.010G030600 Phaseolus vulgaris
Potri.002G249400 Populus trichocarpa
Pp3c23_8470 Physcomitrium patens
PRCOL_00000494 Prasinoderma coloniale
Prupe.8G192400 Prunus persica
Psat0s4060g0040 Pisum sativum
PSO017G2440 Papaver somniferum
PSO675G5723 Papaver somniferum
QL09p045696 Quercus lobata
RcHm_v2.0_Chr6g0283291 Rosa chinensis
RcHm_v2.0_Chr6g0283341 Rosa chinensis
Rhsim13G0051700 Rhododendron simsii
Sc05g0001800 Simmondsia chinensis
Sed0015233 Sechium edule
SEGI_05193 Sequoiadendron giganteum
SEGI_30787 Sequoiadendron giganteum
SEGI_39275 Sequoiadendron giganteum
SGA_v2.0_scaffold77G25288 Striga asiatica
SMO117G0101 Selaginella moellendorffii
Solyc09g056350.4 Solanum lycopersicum
Sopen09g020500 Solanum pennellii
Sp3g06320 Schrenkiella parvula
TAR362G0288 Trochodendron aralioides
TAR362G0363 Trochodendron aralioides
THA.LOC104802652 Tarenaya hassleriana
Thecc.01G213100 Theobroma cacao
Thhalv10019992m.g Eutrema salsugineum
TPR.G1980 Trifolium pratense
TWI75G0482 Tripterygium wilfordii
unitig_699.g19751 Utricularia gibba
vmacro02807 Vaccinium macrocarpon
vmacro06989 Vaccinium macrocarpon
Zm00001eb202960 Zea mays

User provided reference genes

Program Settings