Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33590 Brassica napus
Aa31LG1G26580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1981 Anthoceros agrestis
Actinidia22779 Actinidia chinensis
Actinidia22834 Actinidia chinensis
AL4G44090 Arabidopsis lyrata
Aqoxy1G01631 Aquilegia oxysepala
Aqoxy1G01632 Aquilegia oxysepala
Aqoxy5G04142 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6Q8RNL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CQPK1H Arachis hypogaea
AT2G44990 Arabidopsis thaliana
ATR0057G126 Amborella trichopoda
Atru.chr3.878 Acer truncatum
Atru.chr3.879 Acer truncatum
Atru.chr3.880 Acer truncatum
AUR62004137 Chenopodium quinoa
AUR62013699 Chenopodium quinoa
BcaC02g07127 Brassica carinata
BolC4t28641H Brassica oleracea
BraA04t18821Z Brassica rapa
C04p71360 Brassica napus
CAN.G899.28 Capsicum annuum
CARHR140250 Cardamine hirsuta
Carub.0004s2759 Capsella rubella
Ca_02316_v3 Cicer arietinum L.
Cc02_g24750 Coffea canephora
CDE11G1089 Ceratophyllum demersum
Cfa011118 Carpinus fangiana
Ciclev10027500m.g Citrus clementina
CiPaw.13G030000 Carya illinoinensis
ClCG06G002420 Citrullus lanatus
COL.COLO4_12447 Corchorus olitorius
Cpa.g.sc22.7 Carica papaya
Cre06.g278199 Chlamydomonas reinhardtii
Cre09.g395362 Chlamydomonas reinhardtii
Cre12.g488350 Chlamydomonas reinhardtii
Cre16.g657750 Chlamydomonas reinhardtii
CsaV3_6G008730 Cucumis sativus L.
CSS0033793 Camellia sinensis var. sinensis
CSS0041110 Camellia sinensis var. sinensis
DCAR_031889 Daucus carota
Dinv44096 Davidia involucrata
Duzib138G0106 Durio zibethinus
ECA240G4128 Erigeron canadensis
EL10Ac1g00808 Beta vulgaris
Eucgr.E01594 Eucalyptus grandis
FAN01G0243 Fragaria x ananassa
FAN03G1053 Fragaria x ananassa
FAN06G0349 Fragaria x ananassa
FAN06G2506 Fragaria x ananassa
FvH4_7g10450 Fragaria vesca
Glyma.01G073200 Glycine max
Glyma.11G161947 Glycine max
Gohir.A12G096200 Gossypium hirsutum
Gohir.D12G098900 Gossypium hirsutum
Gorai.008G107600 Gossypium raimondii
GSVIVG01018217001 Vitis vinifera
HanXRQChr13g0422761 Helianthus annuus
Haze_02744 Corylus avellana
Hma1.2p1_0681F.1_g202470 Hydrangea macrophylla
Hma1.2p1_0681F.1_g202480 Hydrangea macrophylla
HPP92_014493 Vanilla planifolia
HPP92_014494 Vanilla planifolia
HPP92_022466 Vanilla planifolia
Lalb_Chr03g0040071 Lupinus albus
Lalb_Chr03g0040081 Lupinus albus
Lalb_Chr03g0040091 Lupinus albus
Lj1g0018675 Lotus japonicus
Lj7C540G12 Lonicera japonica
Lsat_1_v5_gn_3_129760 Lactuca sativa
Lsat_1_v5_gn_3_130581 Lactuca sativa
Lsat_1_v5_gn_3_130781 Lactuca sativa
Manes.05G051700 Manihot esculenta
Mapoly0075s0089 Marchantia polymorpha
MCO09G176 Micromonas commoda
MCO11G542 Micromonas commoda
MCO11G754 Micromonas commoda
MD07G1110600 Malus domestica
Medtr7g045370 Medicago truncatula
MELO3C022291.2 Cucumis melo
Migut.B01565 Erythranthe guttata
MSTRG.20711 Avicennia marina
Nitab4.5_0003110g0040 Nicotiana tabacum
Nitab4.5_0004415g0050 Nicotiana tabacum
Nn1g00934 Nelumbo nucifera
Oeu002553.1 Olea europaea
Os04g0550600 Oryza sativa ssp. japonica
Peaxi162Scf00377g00829 Petunia axillaris
PGR042G2976 Punica granatum
PGSC0003DMG400026032 Solanum tuberosum
Phvul.008G152801 Phaseolus vulgaris
Potri.014G056800 Populus trichocarpa
Pp3c6_21550 Physcomitrium patens
Pp3c6_21628 Physcomitrium patens
Pp3c7_3120 Physcomitrium patens
PRCOL_00006947 Prasinoderma coloniale
Prupe.2G133900 Prunus persica
Psat3g158440 Pisum sativum
PSO478G2689 Papaver somniferum
PSO782G3316 Papaver somniferum
QL04p034802 Quercus lobata
QL04p034856 Quercus lobata
RcHm_v2.0_Chr1g0342921 Rosa chinensis
RcHm_v2.0_Chr1g0342931 Rosa chinensis
RcHm_v2.0_Chr1g0348141 Rosa chinensis
RcHm_v2.0_Chr1g0348171 Rosa chinensis
RcHm_v2.0_Chr1g0348201 Rosa chinensis
Rhsim07G0033200 Rhododendron simsii
Sabra14G0041400 Salix brachista
SalBow5G0249 Salvia bowleyana
Sc26g0001370 Simmondsia chinensis
Sed0027986 Sechium edule
SEGI_10037 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19204 Striga asiatica
SMO165G0127 Selaginella moellendorffii
Sopen01g036390 Solanum pennellii
Sp4g27060 Schrenkiella parvula
TAR352G0004 Trochodendron aralioides
TAR375G0204 Trochodendron aralioides
THA.LOC104817203 Tarenaya hassleriana
Thecc.01G387500 Theobroma cacao
Thhalv10001733m.g Eutrema salsugineum
TPR.G39056 Trifolium pratense
TPR.G39066 Trifolium pratense
TWI14G0524 Tripterygium wilfordii
unitig_26.g8876 Utricularia gibba
vmacro13470 Vaccinium macrocarpon
VMungo1383G3667 Vigna mungo
Zm00001eb074640 Zea mays

User provided reference genes

Program Settings