Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p32670 Brassica napus
A05p26350 Brassica napus
AL3G36690 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.GC569L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5363L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K13GF2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NA8V5S Arachis hypogaea
ATR0737G002 Amborella trichopoda
Atru.ctg752_3.89 Acer truncatum
BolC1t04139H Brassica oleracea
BolC3t17520H Brassica oleracea
BolC5t32839H Brassica oleracea
BraA01t03396Z Brassica rapa
BraA03t13422Z Brassica rapa
BraA05t21510Z Brassica rapa
C01p41850 Brassica napus
C05p40970 Brassica napus
CAN.G907.3 Capsicum annuum
CARHR098310 Cardamine hirsuta
Carub.0003s2258 Capsella rubella
Cc03_g03710 Coffea canephora
Cc07_g10970 Coffea canephora
CiPaw.01G165300 Carya illinoinensis
CiPaw.07G090400 Carya illinoinensis
CiPaw.08G106900 Carya illinoinensis
ClCG09G007150 Citrullus lanatus
COL.COLO4_12126 Corchorus olitorius
CsaV3_3G013360 Cucumis sativus L.
CsaV3_7G028010 Cucumis sativus L.
CSS0028415 Camellia sinensis var. sinensis
CSS0043804 Camellia sinensis var. sinensis
CSS0045022 Camellia sinensis var. sinensis
DCAR_027212 Daucus carota
DCAR_030633 Daucus carota
Dinv44531 Davidia involucrata
ECA240G3083 Erigeron canadensis
EL10Ac3g06420 Beta vulgaris
FAN07G1618 Fragaria x ananassa
FAN12G3621 Fragaria x ananassa
FAN17G2927 Fragaria x ananassa
FAN22G1306 Fragaria x ananassa
FvH4_4g15440 Fragaria vesca
Glyma.01G238500 Glycine max
Glyma.03G155400 Glycine max
Glyma.10G248500 Glycine max
Glyma.11G005000 Glycine max
Glyma.19G157600 Glycine max
Glyma.20G145600 Glycine max
Gohir.A02G031700 Gossypium hirsutum
Gohir.A09G215300 Gossypium hirsutum
Gohir.A11G255000 Gossypium hirsutum
Gohir.D02G038400 Gossypium hirsutum
Gohir.D09G217800 Gossypium hirsutum
Gohir.D11G232700 Gossypium hirsutum
Gohir.D11G264700 Gossypium hirsutum
Gorai.003G066200 Gossypium raimondii
Gorai.005G042300 Gossypium raimondii
Gorai.006G238700 Gossypium raimondii
Gorai.007G284800 Gossypium raimondii
GSVIVG01017965001 Vitis vinifera
GSVIVG01021842001 Vitis vinifera
HanXRQChr04g0118911 Helianthus annuus
HanXRQChr15g0492031 Helianthus annuus
Hma1.2p1_3079F.1_g332420 Hydrangea macrophylla
HPP92_015928 Vanilla planifolia
Hund09501 Selenicereus undatus
Lalb_Chr02g0142691 Lupinus albus
Lalb_Chr05g0210971 Lupinus albus
Lalb_Chr07g0189661 Lupinus albus
Lalb_Chr23g0273411 Lupinus albus
Lj1g0005264 Lotus japonicus
Lj5g0007110 Lotus japonicus
Lsat_1_v5_gn_7_65621 Lactuca sativa
Lsat_1_v5_gn_8_56520 Lactuca sativa
Manes.03G179500 Manihot esculenta
Manes.05G077700 Manihot esculenta
Manes.09G155600 Manihot esculenta
Manes.15G028500 Manihot esculenta
Mapoly0080s0018 Marchantia polymorpha
MD02G1003000 Malus domestica
MD13G1192200 Malus domestica
MD15G1146200 Malus domestica
MD16G1192800 Malus domestica
Medtr1g104520 Medicago truncatula
Medtr5g006200 Medicago truncatula
Medtr5g006220 Medicago truncatula
Medtr5g006260 Medicago truncatula
Medtr7g095120 Medicago truncatula
Migut.G00335 Erythranthe guttata
Nitab4.5_0000043g0210 Nicotiana tabacum
Nitab4.5_0012971g0020 Nicotiana tabacum
Nn1g02292 Nelumbo nucifera
Nn4g26304 Nelumbo nucifera
Oeu011629.1 Olea europaea
Oeu023395.1 Olea europaea
Oeu031234.1 Olea europaea
Oeu034961.1 Olea europaea
Os01g0778500 Oryza sativa ssp. japonica
Os03g0806800 Oryza sativa ssp. japonica
Os07g0204400 Oryza sativa ssp. japonica
Os07g0572400 Oryza sativa ssp. japonica
PGSC0003DMG400030088 Solanum tuberosum
Phvul.001G152800 Phaseolus vulgaris
Phvul.002G045900 Phaseolus vulgaris
Phvul.007G056800 Phaseolus vulgaris
Potri.005G211000 Populus trichocarpa
Potri.008G152200 Populus trichocarpa
Potri.010G088200 Populus trichocarpa
Potri.013G037800 Populus trichocarpa
Prupe.1G012900 Prunus persica
Prupe.7G268200 Prunus persica
Psat3g063680 Pisum sativum
Psat4g210480 Pisum sativum
RcHm_v2.0_Chr4g0416351 Rosa chinensis
Rhsim02G0023700 Rhododendron simsii
SalBow2G3603 Salvia bowleyana
Sed0006679 Sechium edule
Sed0017079 Sechium edule
Sed0021654 Sechium edule
SEGI_00264 Sequoiadendron giganteum
SEGI_12043 Sequoiadendron giganteum
SEGI_39026 Sequoiadendron giganteum
Solyc09g075980.3 Solanum lycopersicum
TAR633G0013 Trochodendron aralioides
TAR636G0808 Trochodendron aralioides
Thecc.01G143500 Theobroma cacao
Thecc.04G230800 Theobroma cacao
Thecc.05G288200 Theobroma cacao
Zm00001eb107360 Zea mays
Zm00001eb151540 Zea mays

User provided reference genes

Program Settings