Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p42230 Brassica napus
A05p27230 Brassica napus
Aa31LG8G8110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis
Actinidia01470 Actinidia chinensis
Actinidia40266 Actinidia chinensis
AL3G35480 Arabidopsis lyrata
Aqoxy2G03026 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GB8LCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea
AT3G21400 Arabidopsis thaliana
ATR0706G092 Amborella trichopoda
Atru.chr4.2827 Acer truncatum
AUR62036825 Chenopodium quinoa
AUR62038616 Chenopodium quinoa
AUR62043167 Chenopodium quinoa
BcaB04g19166 Brassica carinata
BcaB06g26235 Brassica carinata
BcaC01g03506 Brassica carinata
BcaC05g28170 Brassica carinata
BolC3t17454H Brassica oleracea
BolC5t32937H Brassica oleracea
BolC7t43135H Brassica oleracea
BraA03t13376Z Brassica rapa
BraA05t21612Z Brassica rapa
C03p51690 Brassica napus
C05p42070 Brassica napus
CAN.G556.12 Capsicum annuum
CANSAT78G1428 Cannabis sativa
CARHR097370 Cardamine hirsuta
Carub.0003s2143 Capsella rubella
Ca_01966_v3 Cicer arietinum L.
Cc00_g10580 Coffea canephora
CDE02G2676 Ceratophyllum demersum
CDE02G3826 Ceratophyllum demersum
CDE09G1305 Ceratophyllum demersum
Cfa015373 Carpinus fangiana
Ciclev10005978m.g Citrus clementina
CiPaw.01G149700 Carya illinoinensis
CiPaw.02G083900 Carya illinoinensis
ClCG06G005230 Citrullus lanatus
Cpa.g.sc16.161 Carica papaya
CsaV3_6G017270 Cucumis sativus L.
CSS0011440 Camellia sinensis var. sinensis
CSS0018730 Camellia sinensis var. sinensis
CSS0030149 Camellia sinensis var. sinensis
DCAR_030534 Daucus carota
Dinv29771 Davidia involucrata
Duzib151G0152 Durio zibethinus
ECA240G0281 Erigeron canadensis
EL10Ac3g06586 Beta vulgaris
Eucgr.H03897 Eucalyptus grandis
FAN07G2255 Fragaria x ananassa
FAN12G2474 Fragaria x ananassa
FAN12G2613 Fragaria x ananassa
FAN17G1774 Fragaria x ananassa
FAN22G0279 Fragaria x ananassa
FvH4_4g17860 Fragaria vesca
Glyma.09G045900 Glycine max
Glyma.15G153100 Glycine max
Gohir.A02G048800 Gossypium hirsutum
Gohir.D02G054100 Gossypium hirsutum
Gorai.005G059600 Gossypium raimondii
GSVIVG01017744001 Vitis vinifera
HanXRQChr03g0079991 Helianthus annuus
Haze_01224 Corylus avellana
Haze_01225 Corylus avellana
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla
HPP92_001321 Vanilla planifolia
Lalb_Chr18g0051761 Lupinus albus
Lalb_Chr20g0114491 Lupinus albus
Lj6A673G88 Lonicera japonica
Lj6g0000146 Lotus japonicus
Lsat_1_v5_gn_5_49301 Lactuca sativa
Manes.03G194000 Manihot esculenta
Manes.15G013500 Manihot esculenta
Mapoly0041s0011 Marchantia polymorpha
MBI19_g12810_MAGBIO Magnolia biondii
MBI19_g30830_MAGBIO Magnolia biondii
MD13G1169900 Malus domestica
MD16G1171400 Malus domestica
Medtr1g085900 Medicago truncatula
Medtr2g436940 Medicago truncatula
MELO3C021343.2 Cucumis melo
Migut.N00097 Erythranthe guttata
MSTRG.21799 Avicennia marina
Nitab4.5_0003749g0060 Nicotiana tabacum
Nitab4.5_0003972g0010 Nicotiana tabacum
Nn5g30060 Nelumbo nucifera
Oeu023291.2 Olea europaea
Oeu027733.1 Olea europaea
Os12g0540700 Oryza sativa ssp. japonica
Peaxi162Scf00534g00212 Petunia axillaris
PGR031G1107 Punica granatum
PGSC0003DMG400022662 Solanum tuberosum
Phvul.009G246800 Phaseolus vulgaris
Potri.008G210100 Populus trichocarpa
Potri.010G024000 Populus trichocarpa
Pp3c1_29830 Physcomitrium patens
Prupe.1G138200 Prunus persica
Psat1g153280 Pisum sativum
PSO170G3586 Papaver somniferum
PSO210G2816 Papaver somniferum
QL06p008580 Quercus lobata
RcHm_v2.0_Chr4g0421971 Rosa chinensis
Rhsim04G0220300 Rhododendron simsii
Sabra08G0154300 Salix brachista
Sabra10G0014900 Salix brachista
SalBow5G1281 Salvia bowleyana
Sc13g0003510 Simmondsia chinensis
Sed0014998 Sechium edule
SEGI_25455 Sequoiadendron giganteum
SGA_v2.0_scaffold55G19699 Striga asiatica
Solyc01g067080.3 Solanum lycopersicum
Sopen01g028790 Solanum pennellii
Sp3g19430 Schrenkiella parvula
TAR365G0221 Trochodendron aralioides
TAR365G0700 Trochodendron aralioides
TAR636G3617 Trochodendron aralioides
THA.LOC104820251 Tarenaya hassleriana
Thecc.04G283000 Theobroma cacao
Thhalv10021583m.g Eutrema salsugineum
TPR.G26808 Trifolium pratense
TWI53G0242 Tripterygium wilfordii
unitig_26.g10542 Utricularia gibba
vmacro08134 Vaccinium macrocarpon
VMungo1309G0529 Vigna mungo
Zm00001eb410420 Zea mays

User provided reference genes

Program Settings