Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p08000 Brassica napus
Aa31LG5G23170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis
Actinidia13795 Actinidia chinensis
Actinidia29142 Actinidia chinensis
Ah.11g045330 Amaranthus hybridus
AL4G34980 Arabidopsis lyrata
Aqoxy1G00752 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea
AT2G38000 Arabidopsis thaliana
ATR0618G129 Amborella trichopoda
Atru.chr8.2129 Acer truncatum
AUR62041356 Chenopodium quinoa
BcaB02g09226 Brassica carinata
BcaB02g09227 Brassica carinata
BcaC02g11941 Brassica carinata
BcaC02g11943 Brassica carinata
BcaC04g24204 Brassica carinata
BolC1t02105H Brassica oleracea
BolC4t22573H Brassica oleracea
BraA05t19766Z Brassica rapa
BraA05t21464Z Brassica rapa
C04p09660 Brassica napus
CAN.G338.65 Capsicum annuum
CAN.G686.13 Capsicum annuum
CANSAT35G1087 Cannabis sativa
CARHR132560 Cardamine hirsuta
Carub.0004s1997 Capsella rubella
Ca_09158_v3 Cicer arietinum L.
Cc02_g12960 Coffea canephora
Cc06_g01790 Coffea canephora
CDE04G0224 Ceratophyllum demersum
CDE07G0746 Ceratophyllum demersum
Cfa017268 Carpinus fangiana
Ciclev10011790m.g Citrus clementina
CiPaw.10G153700 Carya illinoinensis
ClCG04G007320 Citrullus lanatus
COL.COLO4_14632 Corchorus olitorius
Cpa.g.sc56.97 Carica papaya
CsaV3_4G025930 Cucumis sativus L.
CSS0045639 Camellia sinensis var. sinensis
DCAR_024040 Daucus carota
Dinv35521 Davidia involucrata
Duzib093G0682 Durio zibethinus
Duzib128G0993 Durio zibethinus
ECA236G0495 Erigeron canadensis
EL10Ac5g11535 Beta vulgaris
Eucgr.B02761 Eucalyptus grandis
FAN02G2404 Fragaria x ananassa
FAN05G0163 Fragaria x ananassa
FAN09G0680 Fragaria x ananassa
FAN14G2872 Fragaria x ananassa
FvH4_6g12250 Fragaria vesca
Glyma.07G143100 Glycine max
Gohir.A01G178136 Gossypium hirsutum
Gohir.A04G087500 Gossypium hirsutum
Gohir.A13G086740 Gossypium hirsutum
Gohir.D04G127900 Gossypium hirsutum
Gohir.D09G137350 Gossypium hirsutum
Gohir.D13G085200 Gossypium hirsutum
Gorai.006G157700 Gossypium raimondii
Gorai.012G110900 Gossypium raimondii
GSVIVG01034026001 Vitis vinifera
HanXRQChr04g0124711 Helianthus annuus
Haze_20934 Corylus avellana
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla
HPP92_006629 Vanilla planifolia
HPP92_006646 Vanilla planifolia
HPP92_006654 Vanilla planifolia
Lalb_Chr01g0022871 Lupinus albus
Lj1g0026135 Lotus japonicus
Lj2A83T75 Lonicera japonica
Lsat_1_v5_gn_5_162881 Lactuca sativa
Lsat_1_v5_gn_8_82341 Lactuca sativa
Manes.08G086700 Manihot esculenta
Mapoly0040s0094 Marchantia polymorpha
MBI05_g36624_MAGBIO Magnolia biondii
MBI05_g36625_MAGBIO Magnolia biondii
MD04G1144600 Malus domestica
MD04G1144700 Malus domestica
MD12G1158600 Malus domestica
Medtr7g066250 Medicago truncatula
MELO3C003219.2 Cucumis melo
Migut.J00236 Erythranthe guttata
Migut.J00237 Erythranthe guttata
MSTRG.5605 Avicennia marina
Nitab4.5_0000008g0510 Nicotiana tabacum
Nitab4.5_0007539g0010 Nicotiana tabacum
Nn2g13580 Nelumbo nucifera
Oeu015011.1 Olea europaea
Os05g0316200 Oryza sativa ssp. japonica
Peaxi162Scf01352g00015 Petunia axillaris
PGR031G3170 Punica granatum
PGSC0003DMG400020333 Solanum tuberosum
Phvul.008G111400 Phaseolus vulgaris
Potri.006G095400 Populus trichocarpa
Pp3c16_16710 Physcomitrium patens
Prupe.6G269000 Prunus persica
Psat3g135200 Pisum sativum
PSO384G3626 Papaver somniferum
PSO585G0039 Papaver somniferum
QL05p054729 Quercus lobata
QL07p036284 Quercus lobata
QL07p036316 Quercus lobata
QL07p036333 Quercus lobata
RcHm_v2.0_Chr3g0464051 Rosa chinensis
Rhsim05G0203500 Rhododendron simsii
Sabra06G0073200 Salix brachista
Sc25g0003370 Simmondsia chinensis
Sed0002088 Sechium edule
SEGI_08405 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26780 Striga asiatica
SMO172G0100 Selaginella moellendorffii
Solyc09g011880.3 Solanum lycopersicum
Sopen09g006700 Solanum pennellii
Sp4g20320 Schrenkiella parvula
TAR633G1690 Trochodendron aralioides
TAR636G2503 Trochodendron aralioides
THA.LOC104823390 Tarenaya hassleriana
Thecc.05G024000 Theobroma cacao
Thhalv10016725m.g Eutrema salsugineum
Thhalv10017300m.g Eutrema salsugineum
TPR.G29287 Trifolium pratense
TPR.G34865 Trifolium pratense
TWI77G0608 Tripterygium wilfordii
unitig_26.g9105 Utricularia gibba
vmacro20226 Vaccinium macrocarpon
VMungo1383G1007 Vigna mungo
Zm00001eb169630 Zea mays

User provided reference genes

Program Settings