Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40350 Brassica napus
Aa31LG2G4460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis
Actinidia02708 Actinidia chinensis
Actinidia17537 Actinidia chinensis
AL5G18490 Arabidopsis lyrata
Aqoxy3G03321 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea
AT3G28760 Arabidopsis thaliana
ATR0564G024 Amborella trichopoda
Atru.BG.207.p Acer truncatum
Atru.chr3.96 Acer truncatum
AUR62031615 Chenopodium quinoa
AUR62038861 Chenopodium quinoa
BcaC06g30896 Brassica carinata
BcaC06g33639 Brassica carinata
BolC7t44287H Brassica oleracea
BraA06t26953Z Brassica rapa
C07p37700 Brassica napus
CAN.G579.8 Capsicum annuum
CANSAT64G1183 Cannabis sativa
CANSAT64G2140 Cannabis sativa
CARHR151760 Cardamine hirsuta
Carub.0005s0731 Capsella rubella
Ca_04272_v3 Cicer arietinum L.
Cc07_g03180 Coffea canephora
CDE02G1972 Ceratophyllum demersum
CDE02G2631 Ceratophyllum demersum
Ciclev10012867m.g Citrus clementina
CiPaw.03G029000 Carya illinoinensis
ClCG10G014940 Citrullus lanatus
COL.COLO4_36112 Corchorus olitorius
Cpa.g.sc14.19 Carica papaya
Cre05.g248250 Chlamydomonas reinhardtii
CsaV3_3G041590 Cucumis sativus L.
CSS0024892 Camellia sinensis var. sinensis
CSS0026374 Camellia sinensis var. sinensis
CSS0026498 Camellia sinensis var. sinensis
CSS0037615 Camellia sinensis var. sinensis
DCAR_021653 Daucus carota
Dinv33738 Davidia involucrata
Duzib187G1598 Durio zibethinus
ECA232G4667 Erigeron canadensis
EL10Ac2g02949 Beta vulgaris
Eucgr.J01218 Eucalyptus grandis
FAN02G2663 Fragaria x ananassa
FAN14G0759 Fragaria x ananassa
FvH4_6g49080 Fragaria vesca
Glyma.13G064100 Glycine max
Glyma.19G020800 Glycine max
Gohir.A07G215200 Gossypium hirsutum
Gohir.D07G222100 Gossypium hirsutum
Gorai.001G256400 Gossypium raimondii
GSVIVG01011374001 Vitis vinifera
HanXRQChr09g0253281 Helianthus annuus
HanXRQChr09g0265461 Helianthus annuus
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla
Hund15626 Selenicereus undatus
Lalb_Chr21g0318901 Lupinus albus
Lj2g0007765 Lotus japonicus
Lju41C23G10 Lonicera japonica
Lsat_1_v5_gn_0_26800 Lactuca sativa
Lsat_1_v5_gn_3_53141 Lactuca sativa
Lsat_1_v5_gn_4_177200 Lactuca sativa
Lsat_1_v5_gn_4_177220 Lactuca sativa
Lsat_1_v5_gn_5_56640 Lactuca sativa
Manes.15G177000 Manihot esculenta
Mapoly0005s0075 Marchantia polymorpha
MBI02_g10680_MAGBIO Magnolia biondii
MCO08G127 Micromonas commoda
MD09G1048800 Malus domestica
MD15G1234700 Malus domestica
Medtr0804s0020 Medicago truncatula
Medtr1g039990 Medicago truncatula
MELO3C009883.2 Cucumis melo
Migut.H00904 Erythranthe guttata
Nitab4.5_0000002g0350 Nicotiana tabacum
Nitab4.5_0003081g0050 Nicotiana tabacum
Nn4g23084 Nelumbo nucifera
Oeu060929.1 Olea europaea
Os03g0170300 Oryza sativa ssp. japonica
Peaxi162Scf00451g00822 Petunia axillaris
PGR083G0972 Punica granatum
PGSC0003DMG400009217 Solanum tuberosum
PGSC0003DMG400013970 Solanum tuberosum
Phvul.004G027100 Phaseolus vulgaris
Potri.017G080300 Populus trichocarpa
Pp3c10_1080 Physcomitrium patens
Pp3c10_13710 Physcomitrium patens
Pp3c10_2120 Physcomitrium patens
Pp3c15_19890 Physcomitrium patens
Pp3c1_20750 Physcomitrium patens
Pp3c1_20753 Physcomitrium patens
Pp3c20_10280 Physcomitrium patens
Pp3c20_4730 Physcomitrium patens
Pp3c23_20410 Physcomitrium patens
Pp3c2_18540 Physcomitrium patens
Pp3c8_20190 Physcomitrium patens
Pp3c9_19570 Physcomitrium patens
PRCOL_00003957 Prasinoderma coloniale
Prupe.3G270100 Prunus persica
Psat1g075640 Pisum sativum
PSO591G0110 Papaver somniferum
PSO832G2479 Papaver somniferum
QL02p081203 Quercus lobata
RcHm_v2.0_Chr2g0168871 Rosa chinensis
Rhsim08G0067900 Rhododendron simsii
Sabra17G0072000 Salix brachista
Sabra17G0081400 Salix brachista
SalBow1G4287 Salvia bowleyana
Sc14g0005980 Simmondsia chinensis
Sed0009974 Sechium edule
SEGI_14685 Sequoiadendron giganteum
SEGI_18941 Sequoiadendron giganteum
SGA_v2.0_scaffold59G20672 Striga asiatica
Solyc03g058860.3 Solanum lycopersicum
Sopen03g012680 Solanum pennellii
Sp2g17410 Schrenkiella parvula
TAR622G0709 Trochodendron aralioides
TAR729G0002 Trochodendron aralioides
THA.LOC104823933 Tarenaya hassleriana
Thecc.04G099800 Theobroma cacao
Thhalv10004593m.g Eutrema salsugineum
TPR.G10370 Trifolium pratense
TWI34G1337 Tripterygium wilfordii
unitig_21.g20922 Utricularia gibba
vmacro18203 Vaccinium macrocarpon
VMungo0464G0585 Vigna mungo
Zm00001eb402270 Zea mays

User provided reference genes

Program Settings