Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia07224 Actinidia chinensis
Actinidia12426 Actinidia chinensis
Actinidia24189 Actinidia chinensis
Ah.09g224330 Amaranthus hybridus
Ah.14g079100 Amaranthus hybridus
Ah.14g079240 Amaranthus hybridus
Aqoxy6G01050 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4ZS2ZJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.78KFMW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5ZNF6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U641A1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPZ3Q7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4NXZ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YR9HNH Arachis hypogaea
ATR0598G193 Amborella trichopoda
ATR0598G249 Amborella trichopoda
ATR0598G256 Amborella trichopoda
ATR0598G294 Amborella trichopoda
Atru.chr4.239 Acer truncatum
AUR62002207 Chenopodium quinoa
AUR62003481 Chenopodium quinoa
AUR62015493 Chenopodium quinoa
AUR62017790 Chenopodium quinoa
CAN.G1.46 Capsicum annuum
CAN.G3.7 Capsicum annuum
CANSAT01G0770 Cannabis sativa
Ca_17713_v3 Cicer arietinum L.
Ca_20317_v3 Cicer arietinum L.
Ca_22792_v3 Cicer arietinum L.
Cc01_g19360 Coffea canephora
Cc02_g18000 Coffea canephora
Cfa002710 Carpinus fangiana
Cfa002713 Carpinus fangiana
Cfa002714 Carpinus fangiana
Ciclev10025690m.g Citrus clementina
CiPaw.03G138500 Carya illinoinensis
Cpa.g.sc1.282 Carica papaya
Cpa.g.sc131.23 Carica papaya
CSS0004323 Camellia sinensis var. sinensis
CSS0011017 Camellia sinensis var. sinensis
DCAR_023269 Daucus carota
Dinv07032 Davidia involucrata
Dinv07189 Davidia involucrata
Dinv12556 Davidia involucrata
Dinv16779 Davidia involucrata
Dinv20308 Davidia involucrata
Duzib147G1157 Durio zibethinus
Duzib187G0709 Durio zibethinus
ECA246G2885 Erigeron canadensis
EL10Ac1g00741 Beta vulgaris
Eucgr.H00590 Eucalyptus grandis
Glyma.05G181300 Glycine max
Glyma.08G139000 Glycine max
Gohir.A11G199500 Gossypium hirsutum
Gohir.A12G093200 Gossypium hirsutum
Gohir.D11G224600 Gossypium hirsutum
Gohir.D12G095100 Gossypium hirsutum
Gorai.007G241900 Gossypium raimondii
Gorai.008G103500 Gossypium raimondii
GSVIVG01011560001 Vitis vinifera
GSVIVG01011561001 Vitis vinifera
GSVIVG01011570001 Vitis vinifera
Haze_05750 Corylus avellana
Haze_24990 Corylus avellana
Hma1.2p1_0281F.1_g113250 Hydrangea macrophylla
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla
HPP92_004203 Vanilla planifolia
Lalb_Chr07g0184981 Lupinus albus
Lalb_Chr10g0094781 Lupinus albus
Lalb_Chr11g0064561 Lupinus albus
Lalb_Chr12g0203671 Lupinus albus
Lj4g0019082 Lotus japonicus
Lsat_1_v5_gn_1_2880 Lactuca sativa
Lsat_1_v5_gn_1_2900 Lactuca sativa
Lsat_1_v5_gn_2_61421 Lactuca sativa
Lsat_1_v5_gn_3_92501 Lactuca sativa
Lsat_1_v5_gn_4_172441 Lactuca sativa
Lsat_1_v5_gn_5_36701 Lactuca sativa
Manes.12G138600 Manihot esculenta
MBI19_g02922_MAGBIO Magnolia biondii
Medtr0082s0140 Medicago truncatula
Medtr4g075230 Medicago truncatula
Medtr8g091400 Medicago truncatula
Medtr8g092370 Medicago truncatula
Medtr8g092700 Medicago truncatula
Migut.D00310 Erythranthe guttata
Migut.N01215 Erythranthe guttata
Nitab4.5_0000876g0020 Nicotiana tabacum
Nitab4.5_0004318g0070 Nicotiana tabacum
Nitab4.5_0006309g0060 Nicotiana tabacum
Nn2g15226 Nelumbo nucifera
Nn3g18504 Nelumbo nucifera
Oeu007228.1 Olea europaea
Oeu025733.1 Olea europaea
Os02g0491300 Oryza sativa ssp. japonica
Os12g0111000 Oryza sativa ssp. japonica
Peaxi162Scf00003g00145 Petunia axillaris
Peaxi162Scf00003g00149 Petunia axillaris
Peaxi162Scf00016g01032 Petunia axillaris
Peaxi162Scf00641g00039 Petunia axillaris
PGR083G1472 Punica granatum
PGR083G2817 Punica granatum
PGSC0003DMG400008254 Solanum tuberosum
PGSC0003DMG400019330 Solanum tuberosum
Phvul.002G262300 Phaseolus vulgaris
Phvul.011G140200 Phaseolus vulgaris
Potri.005G079500 Populus trichocarpa
Psat7g053120 Pisum sativum
QL06p050421 Quercus lobata
Rhsim04G0161200 Rhododendron simsii
Rhsim09G0083000 Rhododendron simsii
Rhsim09G0083300 Rhododendron simsii
Rhsim09G0083400 Rhododendron simsii
Rhsim13G0107200 Rhododendron simsii
Sabra07G0072700 Salix brachista
SalBow3G0772 Salvia bowleyana
SalBow4G0595 Salvia bowleyana
Sc18g0004880 Simmondsia chinensis
SGA_v2.0_scaffold55G19813 Striga asiatica
Solyc09g065320.3 Solanum lycopersicum
Solyc10g051090.3 Solanum lycopersicum
Sopen09g027060 Solanum pennellii
Sopen10g022790 Solanum pennellii
TAR622G0191 Trochodendron aralioides
TAR629G3443 Trochodendron aralioides
Thecc.01G107000 Theobroma cacao
TPR.G2161 Trifolium pratense
unitig_0.g118 Utricularia gibba
unitig_0.g119 Utricularia gibba
VMungo0251G2066 Vigna mungo

User provided reference genes

Program Settings