Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34700 Brassica napus
Aa31LG2G5830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis
Actinidia09844 Actinidia chinensis
Actinidia09845 Actinidia chinensis
Ah.03g136370 Amaranthus hybridus
AL5G15580 Arabidopsis lyrata
Aqoxy5G03151 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea
AT3G26730 Arabidopsis thaliana
ATR0582G122 Amborella trichopoda
Atru.chr6.2688 Acer truncatum
Atru.chr6.2689 Acer truncatum
Atru.chr6.2690 Acer truncatum
AUR62037834 Chenopodium quinoa
AUR62041071 Chenopodium quinoa
AUR62041072 Chenopodium quinoa
BcaB07g30217 Brassica carinata
BcaC03g17381 Brassica carinata
BolC2t11398H Brassica oleracea
BraA02t08478Z Brassica rapa
C02p53260 Brassica napus
CANSAT64G2805 Cannabis sativa
CARHR147750 Cardamine hirsuta
Carub.0005s0473 Capsella rubella
Ca_08138_v3 Cicer arietinum L.
CBR_g4363 Chara braunii
Cc07_g01250 Coffea canephora
CDE05G1324 Ceratophyllum demersum
CDE05G2071 Ceratophyllum demersum
Ciclev10014332m.g Citrus clementina
CiPaw.03G002300 Carya illinoinensis
ClCG05G012640 Citrullus lanatus
COL.COLO4_13369 Corchorus olitorius
Cpa.g.sc70.72 Carica papaya
Cre03.g144687 Chlamydomonas reinhardtii
Cre16.g681250 Chlamydomonas reinhardtii
Cre16.g681251 Chlamydomonas reinhardtii
CsaV3_3G027770 Cucumis sativus L.
CSS0001742 Camellia sinensis var. sinensis
CSS0035612 Camellia sinensis var. sinensis
DCAR_014471 Daucus carota
Dinv33279 Davidia involucrata
Duzib147G1044 Durio zibethinus
Duzib187G0315 Durio zibethinus
ECA246G2252 Erigeron canadensis
EL10Ac6g13395 Beta vulgaris
Eucgr.I01601 Eucalyptus grandis
FAN02G1205 Fragaria x ananassa
FAN02G4165 Fragaria x ananassa
FAN09G3006 Fragaria x ananassa
FAN14G4217 Fragaria x ananassa
FvH4_6g54271 Fragaria vesca
Glyma.16G048700 Glycine max
Glyma.19G103000 Glycine max
Gohir.A10G070000 Gossypium hirsutum
Gohir.D10G081100 Gossypium hirsutum
Gorai.011G088400 Gossypium raimondii
GSVIVG01032990001 Vitis vinifera
HanXRQChr17g0550941 Helianthus annuus
HanXRQChr17g0550951 Helianthus annuus
HanXRQChr17g0550971 Helianthus annuus
Haze_14947 Corylus avellana
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla
Hma1.2p1_0868F.1_g230520 Hydrangea macrophylla
HPP92_024403 Vanilla planifolia
Hund04198 Selenicereus undatus
Lalb_Chr24g0403151 Lupinus albus
Lj1g0013684 Lotus japonicus
Lj1g0026027 Lotus japonicus
Lju41A60G26 Lonicera japonica
Lsat_1_v5_gn_0_22580 Lactuca sativa
Manes.11G077000 Manihot esculenta
Mapoly0006s0082 Marchantia polymorpha
MBI07_g41894_MAGBIO Magnolia biondii
MCO15G395 Micromonas commoda
MD09G1003000 Malus domestica
MD17G1007100 Malus domestica
Medtr7g084020 Medicago truncatula
MELO3C014817.2 Cucumis melo
Migut.K01485 Erythranthe guttata
MSTRG.15572 Avicennia marina
Nitab4.5_0000519g0320 Nicotiana tabacum
Nitab4.5_0002172g0120 Nicotiana tabacum
Nn4g22141 Nelumbo nucifera
Oeu003415.3 Olea europaea
Os02g0516600 Oryza sativa ssp. japonica
Peaxi162Scf00420g00836 Petunia axillaris
PGR142G0457 Punica granatum
Phvul.001G084800 Phaseolus vulgaris
Potri.014G145300 Populus trichocarpa
Pp3c20_8910 Physcomitrium patens
Prupe.3G313200 Prunus persica
Psat0s2046g0080 Pisum sativum
Psat0s2046g0120 Pisum sativum
Psat2g052360 Pisum sativum
Psat2g087400 Pisum sativum
Psat2g087520 Pisum sativum
Psat3g093480 Pisum sativum
PSO017G0597 Papaver somniferum
PSO478G4855 Papaver somniferum
QL02p069613 Quercus lobata
RcHm_v2.0_Chr2g0176461 Rosa chinensis
Rhsim10G0001400 Rhododendron simsii
Sabra14G0109500 Salix brachista
Sc07g0003750 Simmondsia chinensis
Sc07g0003760 Simmondsia chinensis
Sed0023591 Sechium edule
SEGI_23511 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17632 Striga asiatica
SHI11389 Sapria himalayana
SMO141G0304 Selaginella moellendorffii
Solyc02g094510.4 Solanum lycopersicum
Sopen02g039190 Solanum pennellii
Sp2g15850 Schrenkiella parvula
TAR629G1421 Trochodendron aralioides
THA.LOC104805300 Tarenaya hassleriana
Thecc.04G047500 Theobroma cacao
Thhalv10003691m.g Eutrema salsugineum
TPR.G10339 Trifolium pratense
TWI32G0148 Tripterygium wilfordii
TWI60G1491 Tripterygium wilfordii
unitig_0.g2405 Utricularia gibba
unitig_0.g2406 Utricularia gibba
vmacro22244 Vaccinium macrocarpon
VMungo1383G1903 Vigna mungo
Zm00001eb242020 Zea mays

User provided reference genes

Program Settings