Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22360 Brassica napus
Aa31LG4G2200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1791 Anthoceros agrestis
Actinidia09807 Actinidia chinensis
AL2G39210 Arabidopsis lyrata
Aqoxy4G00317 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea
AT1G78810 Arabidopsis thaliana
ATR0012G052 Amborella trichopoda
Atru.chr2.2107 Acer truncatum
AUR62007119 Chenopodium quinoa
AUR62019577 Chenopodium quinoa
AUR62042783 Chenopodium quinoa
BcaB05g25155 Brassica carinata
BcaC03g15839 Brassica carinata
BolC2t09603H Brassica oleracea
BraA02t07240Z Brassica rapa
C02p35900 Brassica napus
CANSAT35G0531 Cannabis sativa
CARHR072360 Cardamine hirsuta
Carub.0002s2563 Capsella rubella
Ca_03979_v3 Cicer arietinum L.
Ca_26225_v3 Cicer arietinum L.
Cc05_g11060 Coffea canephora
CDE02G3386 Ceratophyllum demersum
Cfa015710 Carpinus fangiana
Ciclev10024254m.g Citrus clementina
ClCG11G017430 Citrullus lanatus
COL.COLO4_17541 Corchorus olitorius
Cpa.g.sc77.10 Carica papaya
CsaV3_4G033090 Cucumis sativus L.
CSS0028289 Camellia sinensis var. sinensis
CSS0029215 Camellia sinensis var. sinensis
Duzib268G0832 Durio zibethinus
ECA240G2089 Erigeron canadensis
EL10Ac4g08347 Beta vulgaris
Eucgr.F03267 Eucalyptus grandis
Eucgr.F03268 Eucalyptus grandis
Eucgr.F03271 Eucalyptus grandis
FAN11G2230 Fragaria x ananassa
FAN16G1756 Fragaria x ananassa
FAN21G2926 Fragaria x ananassa
FAN25G1049 Fragaria x ananassa
FvH4_3g18260 Fragaria vesca
Glyma.06G229200 Glycine max
Glyma.08G245900 Glycine max
Glyma.12G229800 Glycine max
Glyma.13G269800 Glycine max
Gohir.A01G054200 Gossypium hirsutum
Gohir.D01G042720 Gossypium hirsutum
Gorai.002G054500 Gossypium raimondii
GSVIVG01014195001 Vitis vinifera
HanXRQChr13g0389481 Helianthus annuus
Haze_00805 Corylus avellana
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla
HPP92_012804 Vanilla planifolia
Hund25365 Selenicereus undatus
Lalb_Chr03g0031151 Lupinus albus
Lalb_Chr14g0365891 Lupinus albus
Lalb_Chr24g0400331 Lupinus albus
Lj1P829T26 Lonicera japonica
Lj3g0000770 Lotus japonicus
Lj3g0019341 Lotus japonicus
Lsat_1_v5_gn_9_99841 Lactuca sativa
Manes.15G095100 Manihot esculenta
Mapoly0061s0049 Marchantia polymorpha
Mapoly1798s0001 Marchantia polymorpha
MBI07_g09563_MAGBIO Magnolia biondii
MD11G1264000 Malus domestica
Medtr0022s0280 Medicago truncatula
Medtr2g076330 Medicago truncatula
MELO3C025643.2 Cucumis melo
Migut.M00726 Erythranthe guttata
MSTRG.6678 Avicennia marina
Nitab4.5_0000383g0160 Nicotiana tabacum
Nn1g04444 Nelumbo nucifera
Oeu031029.1 Olea europaea
Os01g0759000 Oryza sativa ssp. japonica
Os06g0153600 Oryza sativa ssp. japonica
Peaxi162Scf00692g00416 Petunia axillaris
PGR031G0069 Punica granatum
PGSC0003DMG400007100 Solanum tuberosum
PGSC0003DMG400021262 Solanum tuberosum
Phvul.005G065400 Phaseolus vulgaris
Phvul.011G162500 Phaseolus vulgaris
Potri.011G109600 Populus trichocarpa
Pp3c23_21590 Physcomitrium patens
Prupe.4G164500 Prunus persica
Psat0s3989g0040 Pisum sativum
Psat0s911g0040 Pisum sativum
Psat4g136000 Pisum sativum
QL12p009545 Quercus lobata
RcHm_v2.0_Chr1g0314351 Rosa chinensis
RcHm_v2.0_Chr1g0357411 Rosa chinensis
RcHm_v2.0_Chr5g0030881 Rosa chinensis
RcHm_v2.0_Chr7g0196621 Rosa chinensis
Rhsim04G0026500 Rhododendron simsii
Rhsim06G0208300 Rhododendron simsii
Sabra11G0096900 Salix brachista
Sabra16G0255800 Salix brachista
SalBow1G5118 Salvia bowleyana
SalBow8G2822 Salvia bowleyana
Sc16g0007610 Simmondsia chinensis
Sed0004545 Sechium edule
SEGI_27593 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23375 Striga asiatica
SHI37128 Sapria himalayana
Solyc07g062410.4 Solanum lycopersicum
Solyc10g007340.3 Solanum lycopersicum
Sopen07g030660 Solanum pennellii
Sopen10g003150 Solanum pennellii
Sopen10g003160 Solanum pennellii
Sopen10g003170 Solanum pennellii
Sp5g33840 Schrenkiella parvula
TAR624G0749 Trochodendron aralioides
THA.LOC104812320 Tarenaya hassleriana
Thecc.07G116600 Theobroma cacao
Thecc.07G117200 Theobroma cacao
Thhalv10018481m.g Eutrema salsugineum
TPR.G11309 Trifolium pratense
TPR.G13942 Trifolium pratense
TWI38G1841 Tripterygium wilfordii
vmacro09492 Vaccinium macrocarpon
vmacro11942 Vaccinium macrocarpon
VMungo1080G1893 Vigna mungo
VMungo1127G0097 Vigna mungo
Zm00001eb152520 Zea mays

User provided reference genes

Program Settings