Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p41140 Brassica napus
Aa31LG5G17620 Aethionema arabicum
Actinidia09487 Actinidia chinensis
Actinidia09488 Actinidia chinensis
Actinidia23727 Actinidia chinensis
Ah.08g213920 Amaranthus hybridus
AL3G18290 Arabidopsis lyrata
Aqoxy2G03103 Aquilegia oxysepala
Aqoxy5G00070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.50JBL9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9R7KTD Arachis hypogaea
AT3G07060 Arabidopsis thaliana
ATR0736G144 Amborella trichopoda
Atru.chr11.2652 Acer truncatum
AUR62008867 Chenopodium quinoa
AUR62031844 Chenopodium quinoa
BcaB05g23643 Brassica carinata
BcaC03g16146 Brassica carinata
BcaC05g29758 Brassica carinata
BcaC05g29836 Brassica carinata
BolC5t34680H Brassica oleracea
BraA05t22840Z Brassica rapa
C05p60330 Brassica napus
CAN.G154.6 Capsicum annuum
CANSAT01G1110 Cannabis sativa
CARHR081640 Cardamine hirsuta
CARHR081650 Cardamine hirsuta
Carub.0003s0657 Capsella rubella
Ca_26562_v3 Cicer arietinum L.
CBR_g38607 Chara braunii
Cc01_g17160 Coffea canephora
CDE06G2585 Ceratophyllum demersum
Cfa008679 Carpinus fangiana
Ciclev10020152m.g Citrus clementina
Ciclev10024634m.g Citrus clementina
CiPaw.01G110500 Carya illinoinensis
ClCG07G001890 Citrullus lanatus
COL.COLO4_07189 Corchorus olitorius
Cpa.g.sc8.165 Carica papaya
CsaV3_3G029870 Cucumis sativus L.
CSS0038727 Camellia sinensis var. sinensis
CSS0045030 Camellia sinensis var. sinensis
DCAR_018556 Daucus carota
Dinv01554 Davidia involucrata
Dinv01555 Davidia involucrata
Dinv09237 Davidia involucrata
Duzib133G0184 Durio zibethinus
Duzib138G0700 Durio zibethinus
ECA236G0120 Erigeron canadensis
EL10Ac7g17774 Beta vulgaris
Eucgr.K03610 Eucalyptus grandis
Eucgr.L02049 Eucalyptus grandis
FAN15G1679 Fragaria x ananassa
FAN24G1416 Fragaria x ananassa
FAN27G1043 Fragaria x ananassa
FvH4_2g19201 Fragaria vesca
Glyma.16G068300 Glycine max
Glyma.19G124200 Glycine max
Gohir.A11G137000 Gossypium hirsutum
Gohir.D11G143350 Gossypium hirsutum
Gorai.007G153600 Gossypium raimondii
GSVIVG01028660001 Vitis vinifera
HanXRQChr04g0110731 Helianthus annuus
Haze_11697 Corylus avellana
Hma1.2p1_1061F.1_g253440 Hydrangea macrophylla
Hma1.2p1_1061F.1_g253450 Hydrangea macrophylla
Hund18348 Selenicereus undatus
Lalb_Chr07g0194051 Lupinus albus
Lj2A644T10 Lonicera japonica
Lj2C634T6 Lonicera japonica
Lj3g0025737 Lotus japonicus
Lsat_1_v5_gn_1_123760 Lactuca sativa
Lsat_1_v5_gn_5_171621 Lactuca sativa
Lsat_1_v5_gn_8_90041 Lactuca sativa
Manes.11G092400 Manihot esculenta
Mapoly0057s0011 Marchantia polymorpha
MD05G1176900 Malus domestica
MD05G1177000 Malus domestica
MD10G1165500 Malus domestica
Medtr4g022660 Medicago truncatula
Medtr7g026915 Medicago truncatula
MELO3C026986.2 Cucumis melo
Migut.D00528 Erythranthe guttata
MSTRG.21425 Avicennia marina
MSTRG.21426 Avicennia marina
Nitab4.5_0000045g0020 Nicotiana tabacum
Nitab4.5_0001872g0040 Nicotiana tabacum
Nn1g07817 Nelumbo nucifera
Os08g0135300 Oryza sativa ssp. japonica
Peaxi162Scf00107g01622 Petunia axillaris
PGR119G0212 Punica granatum
PGSC0003DMG400009670 Solanum tuberosum
Phvul.010G014500 Phaseolus vulgaris
Phvul.010G014600 Phaseolus vulgaris
Potri.002G241366 Populus trichocarpa
Pp3c3_5060 Physcomitrium patens
Pp3c9_6600 Physcomitrium patens
Prupe.8G204000 Prunus persica
Psat2g159600 Pisum sativum
PSO170G1150 Papaver somniferum
PSO674G0067 Papaver somniferum
PSO782G0283 Papaver somniferum
QL06p028105 Quercus lobata
QL06p028120 Quercus lobata
RcHm_v2.0_Chr6g0284991 Rosa chinensis
Rhsim01G0256300 Rhododendron simsii
SalBow6G7080 Salvia bowleyana
Sc24g0003620 Simmondsia chinensis
Sed0017682 Sechium edule
SEGI_19430 Sequoiadendron giganteum
SGA_v2.0_scaffold586G53055 Striga asiatica
SGA_v2.0_scaffold8G04647 Striga asiatica
SHI34881 Sapria himalayana
SHI34885 Sapria himalayana
Solyc09g061380.3 Solanum lycopersicum
Sopen09g024200 Solanum pennellii
Sp3g06000 Schrenkiella parvula
TAR393G0002 Trochodendron aralioides
THA.LOC104818950 Tarenaya hassleriana
Thecc.01G227100 Theobroma cacao
Thhalv10020116m.g Eutrema salsugineum
TPR.G5589 Trifolium pratense
TPR.G638 Trifolium pratense
TWI36G0510 Tripterygium wilfordii
unitig_22.g5305 Utricularia gibba
vmacro14757 Vaccinium macrocarpon
vmacro14760 Vaccinium macrocarpon
VMungo0331G1521 Vigna mungo
VMungo0331G1566 Vigna mungo
Zm00001eb173150 Zea mays

User provided reference genes

Program Settings