Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32140 Brassica napus
Aa31LG5G450 Aethionema arabicum
Actinidia10016 Actinidia chinensis
Actinidia20914 Actinidia chinensis
Ah.05g180670 Amaranthus hybridus
AL1G10640 Arabidopsis lyrata
AL6G52950 Arabidopsis lyrata
Aqoxy7G00322 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea
AT1G01715 Arabidopsis thaliana
AT4G00525 Arabidopsis thaliana
ATR0680G324 Amborella trichopoda
Atru.chr5.461 Acer truncatum
AUR62004346 Chenopodium quinoa
AUR62022552 Chenopodium quinoa
BcaB01g02256 Brassica carinata
BcaC01g06870 Brassica carinata
BcaNung05355 Brassica carinata
BolC3t16187H Brassica oleracea
BraA03t12384Z Brassica rapa
CAN.G78.55 Capsicum annuum
CANSAT56G3634 Cannabis sativa
CARHR248680 Cardamine hirsuta
Carub.0006s3674 Capsella rubella
Ca_07890_v3 Cicer arietinum L.
Cc02_g37900 Coffea canephora
CDE06G0574 Ceratophyllum demersum
Cfa003936 Carpinus fangiana
Ciclev10022632m.g Citrus clementina
CiPaw.01G060100 Carya illinoinensis
CiPaw.02G030100 Carya illinoinensis
ClCG05G001580 Citrullus lanatus
COL.COLO4_12704 Corchorus olitorius
Cpa.g.sc18.247 Carica papaya
CsaV3_3G008970 Cucumis sativus L.
CSS0003041 Camellia sinensis var. sinensis
DCAR_006926 Daucus carota
Dinv32472 Davidia involucrata
Dinv43807 Davidia involucrata
Duzib133G1075 Durio zibethinus
Duzib138G1923 Durio zibethinus
EL10Ac1g00426 Beta vulgaris
Eucgr.D02286 Eucalyptus grandis
FAN01G0390 Fragaria x ananassa
FAN03G2883 Fragaria x ananassa
FAN06G3027 Fragaria x ananassa
FAN06G3847 Fragaria x ananassa
FAN10G0270 Fragaria x ananassa
FvH4_7g14190 Fragaria vesca
Glyma.09G262200 Glycine max
Glyma.18G230000 Glycine max
Gohir.A08G131000 Gossypium hirsutum
Gohir.A11G088300 Gossypium hirsutum
Gohir.D08G152500 Gossypium hirsutum
Gohir.D11G092600 Gossypium hirsutum
Gorai.004G158400 Gossypium raimondii
Gorai.007G098900 Gossypium raimondii
GSVIVG01018349001 Vitis vinifera
GSVIVG01026900001 Vitis vinifera
HanXRQChr13g0426531 Helianthus annuus
Haze_15490 Corylus avellana
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla
HPP92_008504 Vanilla planifolia
Hund16927 Selenicereus undatus
Lalb_Chr19g0127061 Lupinus albus
Lj1g0009386 Lotus japonicus
Lsat_1_v5_gn_7_4500 Lactuca sativa
Manes.01G258100 Manihot esculenta
Manes.05G035300 Manihot esculenta
MBI18_g21561_MAGBIO Magnolia biondii
MD01G1057900 Malus domestica
MD07G1138600 Malus domestica
Medtr7g076690 Medicago truncatula
MELO3C006115.2 Cucumis melo
Migut.N01441 Erythranthe guttata
MSTRG.28221 Avicennia marina
MSTRG.4858 Avicennia marina
Nitab4.5_0001702g0100 Nicotiana tabacum
Nitab4.5_0005277g0010 Nicotiana tabacum
Nitab4.5_0008002g0050 Nicotiana tabacum
Nitab4.5_0008050g0030 Nicotiana tabacum
Nn1g01520 Nelumbo nucifera
Oeu010611.1 Olea europaea
Oeu020560.2 Olea europaea
Oeu031712.2 Olea europaea
Os04g0558500 Oryza sativa ssp. japonica
Peaxi162Scf00020g00240 Petunia axillaris
Peaxi162Scf00191g01430 Petunia axillaris
PGR031G0376 Punica granatum
PGSC0003DMG400000036 Solanum tuberosum
PGSC0003DMG400021646 Solanum tuberosum
Phvul.008G067900 Phaseolus vulgaris
Potri.002G159100 Populus trichocarpa
Potri.014G083100 Populus trichocarpa
Prupe.2G168300 Prunus persica
Psat3g110920 Pisum sativum
PSO210G7571 Papaver somniferum
PSO832G3783 Papaver somniferum
QL08p049008 Quercus lobata
RcHm_v2.0_Chr1g0355101 Rosa chinensis
Rhsim07G0016100 Rhododendron simsii
Sabra02G0126300 Salix brachista
Sabra14G0060500 Salix brachista
SalBow3G2602 Salvia bowleyana
SalBow5G5348 Salvia bowleyana
Sc01g0003370 Simmondsia chinensis
Sed0021596 Sechium edule
Sed0025321 Sechium edule
SEGI_06767 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05664 Striga asiatica
SGA_v2.0_scaffold43G16421 Striga asiatica
Solyc01g094510.2 Solanum lycopersicum
Solyc05g049940.3 Solanum lycopersicum
Sopen01g038320 Solanum pennellii
Sopen05g028300 Solanum pennellii
Sp6g00560 Schrenkiella parvula
TAR374G1295 Trochodendron aralioides
TAR375G0974 Trochodendron aralioides
TAR629G3005 Trochodendron aralioides
THA.LOC104817023 Tarenaya hassleriana
Thecc.01G360200 Theobroma cacao
Thhalv10029047m.g Eutrema salsugineum
TPR.G37820 Trifolium pratense
TWI14G0791 Tripterygium wilfordii
TWI59G0879 Tripterygium wilfordii
unitig_8.g3395 Utricularia gibba
vmacro13279 Vaccinium macrocarpon
VMungo1383G0981 Vigna mungo
Zm00001eb429300 Zea mays

User provided reference genes

Program Settings