Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03960 Brassica napus
A10p22220 Brassica napus
Aa31LG11G12480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4047 Anthoceros agrestis
Actinidia18696 Actinidia chinensis
Actinidia28267 Actinidia chinensis
Ah.13g071240 Amaranthus hybridus
AL6G28220 Arabidopsis lyrata
Aqoxy1G04105 Aquilegia oxysepala
Aqoxy3G02060 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GUDI7G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GZNV26 Arachis hypogaea
AT5G17170 Arabidopsis thaliana
ATR0829G005 Amborella trichopoda
Atru.chr12.2018 Acer truncatum
AUR62005918 Chenopodium quinoa
AUR62028145 Chenopodium quinoa
BcaC03g18534 Brassica carinata
BcaC04g18827 Brassica carinata
BcaNung00424 Brassica carinata
BolC2t06792H Brassica oleracea
BolC9t58838H Brassica oleracea
BraA02t05361Z Brassica rapa
BraA10t44281Z Brassica rapa
C02p08780 Brassica napus
C09p60030 Brassica napus
CAN.G303.70 Capsicum annuum
CANSAT21G2164 Cannabis sativa
CARHR196050 Cardamine hirsuta
Carub.0006s1536 Capsella rubella
Ca_24458_v3 Cicer arietinum L.
Ca_24464_v3 Cicer arietinum L.
CBR_g41688 Chara braunii
CBR_g41690 Chara braunii
Cc02_g00440 Coffea canephora
Cc11_g03890 Coffea canephora
CDE02G0118 Ceratophyllum demersum
CDE02G0767 Ceratophyllum demersum
CDE02G3588 Ceratophyllum demersum
Cfa015906 Carpinus fangiana
Ciclev10012505m.g Citrus clementina
CiPaw.06G020400 Carya illinoinensis
ClCG01G005020 Citrullus lanatus
COL.COLO4_08912 Corchorus olitorius
COL.COLO4_08913 Corchorus olitorius
Cpa.g.sc39.53 Carica papaya
Cre12.g510400 Chlamydomonas reinhardtii
CsaV3_5G005280 Cucumis sativus L.
CSS0001214 Camellia sinensis var. sinensis
DCAR_014570 Daucus carota
Dinv29176 Davidia involucrata
Duzib106G1742 Durio zibethinus
Duzib177G0391 Durio zibethinus
Duzib177G0960 Durio zibethinus
Duzib187G0879 Durio zibethinus
ECA233G2527 Erigeron canadensis
EL10Ac3g05103 Beta vulgaris
Eucgr.K00099 Eucalyptus grandis
FAN01G1199 Fragaria x ananassa
FAN03G0703 Fragaria x ananassa
FAN10G2030 Fragaria x ananassa
FAN10G3926 Fragaria x ananassa
FvH4_7g33550 Fragaria vesca
Glyma.01G229800 Glycine max
Glyma.11G012700 Glycine max
Gohir.A02G139100 Gossypium hirsutum
Gohir.D03G049700 Gossypium hirsutum
Gorai.003G051200 Gossypium raimondii
GSVIVG01024454001 Vitis vinifera
HanXRQChr04g0105241 Helianthus annuus
Haze_00586 Corylus avellana
Hma1.2p1_0758F.1_g213550 Hydrangea macrophylla
Hma1.2p1_0758F.1_g213560 Hydrangea macrophylla
HPP92_025509 Vanilla planifolia
HPP92_025526 Vanilla planifolia
Hund02967 Selenicereus undatus
Lalb_Chr05g0211331 Lupinus albus
Lj3A890T58 Lonicera japonica
Lj3A890T59 Lonicera japonica
LjContig00222g0021869 Lotus japonicus
Lsat_1_v5_gn_8_3801 Lactuca sativa
Manes.08G164800 Manihot esculenta
Mapoly0041s0075 Marchantia polymorpha
MBI04_g27273_MAGBIO Magnolia biondii
MD01G1233200 Malus domestica
MD07G1305400 Malus domestica
Medtr5g008050 Medicago truncatula
MELO3C005432.2 Cucumis melo
Migut.F00106 Erythranthe guttata
MSTRG.26938 Avicennia marina
Nitab4.5_0000021g0330 Nicotiana tabacum
Nitab4.5_0002302g0030 Nicotiana tabacum
Nn1g02035 Nelumbo nucifera
Oeu033092.1 Olea europaea
Os08g0162600 Oryza sativa ssp. japonica
Peaxi162Scf01650g00050 Petunia axillaris
PGR142G0857 Punica granatum
PGSC0003DMG400000569 Solanum tuberosum
Phvul.002G037500 Phaseolus vulgaris
Potri.019G042600 Populus trichocarpa
Pp3c10_15730 Physcomitrium patens
PRCOL_00001509 Prasinoderma coloniale
Prupe.2G323500 Prunus persica
Psat2g187840 Pisum sativum
PSO063G5144 Papaver somniferum
PSO782G5695 Papaver somniferum
QL09p026245 Quercus lobata
RcHm_v2.0_Chr1g0383771 Rosa chinensis
Rhsim09G0211900 Rhododendron simsii
Sabra19G0053200 Salix brachista
SalBow4G0173 Salvia bowleyana
Sc25g0001120 Simmondsia chinensis
Sed0000932 Sechium edule
SEGI_19152 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08502 Striga asiatica
SMO140G0084 Selaginella moellendorffii
Solyc03g096850.4 Solanum lycopersicum
Sopen03g027600 Solanum pennellii
Sp6g27050 Schrenkiella parvula
TAR375G0226 Trochodendron aralioides
TAR375G0371 Trochodendron aralioides
THA.LOC104820874 Tarenaya hassleriana
Thecc.05G207500 Theobroma cacao
Thhalv10014045m.g Eutrema salsugineum
TPR.G37875 Trifolium pratense
TWI60G0061 Tripterygium wilfordii
unitig_52.g17696 Utricularia gibba
unitig_52.g17697 Utricularia gibba
VMungo0720G1055 Vigna mungo
Zm00001eb415470 Zea mays

User provided reference genes

Program Settings