Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24590 Brassica napus
A07p12940 Brassica napus
A07p29750 Brassica napus
A09p39890 Brassica napus
Aa31LG7G8620 Aethionema arabicum
Actinidia28644 Actinidia chinensis
Ah.03g138960 Amaranthus hybridus
AL1G39270 Arabidopsis lyrata
Aqoxy3G00506 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea
AT1G26470 Arabidopsis thaliana
ATR0064G055 Amborella trichopoda
Atru.chr11.1651 Acer truncatum
AUR62003112 Chenopodium quinoa
AUR62007927 Chenopodium quinoa
BcaB03g11990 Brassica carinata
BcaB03g14067 Brassica carinata
BcaC06g35142 Brassica carinata
BolC5t31187H Brassica oleracea
BolC7t42457H Brassica oleracea
BraA07t29067Z Brassica rapa
BraA09t39056Z Brassica rapa
BraA09t39488Z Brassica rapa
C02p24560 Brassica napus
C05p24530 Brassica napus
C07p19380 Brassica napus
CAN.G616.32 Capsicum annuum
CANSAT64G1324 Cannabis sativa
CARHR025490 Cardamine hirsuta
Carub.0001s2455 Capsella rubella
Ca_24569_v3 Cicer arietinum L.
CBR_g4585 Chara braunii
Cc11_g12100 Coffea canephora
Cc11_g12110 Coffea canephora
CDE02G4092 Ceratophyllum demersum
Ciclev10033030m.g Citrus clementina
CiPaw.06G092000 Carya illinoinensis
ClCG00G002570 Citrullus lanatus
ClCG05G023750 Citrullus lanatus
COL.COLO4_27898 Corchorus olitorius
CsaV3_5G033260 Cucumis sativus L.
CSS0014880 Camellia sinensis var. sinensis
DCAR_007189 Daucus carota
Dinv16724 Davidia involucrata
Dinv34077 Davidia involucrata
Duzib248G0204 Durio zibethinus
Duzib251G0249 Durio zibethinus
Duzib251G0730 Durio zibethinus
ECA246G0948 Erigeron canadensis
EL10Ac6g14984 Beta vulgaris
Eucgr.G02454 Eucalyptus grandis
FAN07G0043 Fragaria x ananassa
FAN12G2760 Fragaria x ananassa
FAN17G1885 Fragaria x ananassa
FAN22G0197 Fragaria x ananassa
FvH4_4g30180 Fragaria vesca
Glyma.05G201000 Glycine max
Glyma.08G008300 Glycine max
Gohir.A13G081800 Gossypium hirsutum
Gohir.D13G081600 Gossypium hirsutum
Gorai.013G093500 Gossypium raimondii
GSVIVG01012208001 Vitis vinifera
HanXRQChr12g0375301 Helianthus annuus
HanXRQChr15g0477061 Helianthus annuus
Haze_11918 Corylus avellana
HPP92_014051 Vanilla planifolia
Hund05841 Selenicereus undatus
Hund25185 Selenicereus undatus
Lalb_Chr04g0255711 Lupinus albus
Lalb_Chr10g0098731 Lupinus albus
Lj2g0026655 Lotus japonicus
Lsat_1_v5_gn_3_55960 Lactuca sativa
Manes.01G028500 Manihot esculenta
Mapoly0056s0111 Marchantia polymorpha
MBI16_g10268_MAGBIO Magnolia biondii
MD02G1257200 Malus domestica
MD13G1063500 Malus domestica
MD16G1062000 Malus domestica
Medtr5g044200 Medicago truncatula
Medtr6g053980 Medicago truncatula
MELO3C012147.2 Cucumis melo
Migut.L01198 Erythranthe guttata
MSTRG.7750 Avicennia marina
Nitab4.5_0000231g0430 Nicotiana tabacum
Nitab4.5_0004171g0060 Nicotiana tabacum
Nn3g16162 Nelumbo nucifera
Nn4g23399 Nelumbo nucifera
Oeu048147.1 Olea europaea
Os05g0512500 Oryza sativa ssp. japonica
Peaxi162Scf00175g00019 Petunia axillaris
PGR102G1832 Punica granatum
PGSC0003DMG400028321 Solanum tuberosum
PGSC0003DMG400041308 Solanum tuberosum
PGSC0003DMG400042856 Solanum tuberosum
Phvul.002G282400 Phaseolus vulgaris
Potri.008G095100 Populus trichocarpa
Potri.010G159200 Populus trichocarpa
Pp3c14_19070 Physcomitrium patens
Prupe.1G285900 Prunus persica
Psat2g129720 Pisum sativum
PSO017G1874 Papaver somniferum
PSO478G3582 Papaver somniferum
QL03p072164 Quercus lobata
QL03p072544 Quercus lobata
RcHm_v2.0_Chr4g0438511 Rosa chinensis
Sabra08G0071500 Salix brachista
Sabra10G0120900 Salix brachista
SalBow2G0810 Salvia bowleyana
Sc11g0002390 Simmondsia chinensis
Sed0026741 Sechium edule
SEGI_32210 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07773 Striga asiatica
SGA_v2.0_scaffold36G14451 Striga asiatica
SMO351G0453 Selaginella moellendorffii
Solyc05g012400.4 Solanum lycopersicum
Solyc05g012410.2 Solanum lycopersicum
Sopen05g007220 Solanum pennellii
Sopen05g007230 Solanum pennellii
Sp1g22270 Schrenkiella parvula
TAR622G0987 Trochodendron aralioides
THA.LOC104822014 Tarenaya hassleriana
Thecc.02G332700 Theobroma cacao
Thhalv10009087m.g Eutrema salsugineum
TPR.G24456 Trifolium pratense
TPR.G29681 Trifolium pratense
TWI31G0802 Tripterygium wilfordii
unitig_747.g21188 Utricularia gibba
VMungo0251G0770 Vigna mungo
Zm00001eb292660 Zea mays

User provided reference genes

Program Settings