Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42950 Brassica napus
A06p30300 Brassica napus
Aa31LG10G11090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis
Actinidia00707 Actinidia chinensis
Ah.10g033440 Amaranthus hybridus
AL8G40840 Arabidopsis lyrata
Aqoxy4G03219 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea
AT5G63690 Arabidopsis thaliana
ATR0225G019 Amborella trichopoda
Atru.chr5.1299 Acer truncatum
AUR62034597 Chenopodium quinoa
AUR62036672 Chenopodium quinoa
BcaB02g09737 Brassica carinata
BcaB07g29701 Brassica carinata
BcaC01g02630 Brassica carinata
BcaC03g18221 Brassica carinata
BolC2t12363H Brassica oleracea
BolC2t12364H Brassica oleracea
BolC3t18529H Brassica oleracea
BolC4t22707H Brassica oleracea
BraA02t09218Z Brassica rapa
BraA06t25979Z Brassica rapa
C02p62900 Brassica napus
C03p62750 Brassica napus
CAN.G964.10 Capsicum annuum
CANSAT25G3509 Cannabis sativa
CARHR277600 Cardamine hirsuta
Carub.0008s2446 Capsella rubella
Ca_03230_v3 Cicer arietinum L.
CBR_g24266 Chara braunii
CBR_g26410 Chara braunii
Cc01_g20070 Coffea canephora
CDE02G3716 Ceratophyllum demersum
Cfa006057 Carpinus fangiana
Ciclev10022776m.g Citrus clementina
CiPaw.07G098200 Carya illinoinensis
ClCG03G017360 Citrullus lanatus
COL.COLO4_08051 Corchorus olitorius
CsaV3_1G038790 Cucumis sativus L.
CsaV3_7G018800 Cucumis sativus L.
CSS0022820 Camellia sinensis var. sinensis
DCAR_018372 Daucus carota
Duzib211G0114 Durio zibethinus
ECA240G0292 Erigeron canadensis
EL10Ac3g06921 Beta vulgaris
EL10Ac7g17168 Beta vulgaris
Eucgr.H01614 Eucalyptus grandis
Eucgr.H01617 Eucalyptus grandis
FAN24G0575 Fragaria x ananassa
FAN27G3183 Fragaria x ananassa
FvH4_2g24470 Fragaria vesca
Glyma.01G089000 Glycine max
Glyma.04G146600 Glycine max
Gohir.A12G007700 Gossypium hirsutum
Gohir.D12G007100 Gossypium hirsutum
Gorai.008G007300 Gossypium raimondii
GSVIVG01011025001 Vitis vinifera
HanXRQChr03g0093951 Helianthus annuus
HanXRQChr15g0476421 Helianthus annuus
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla
HPP92_016068 Vanilla planifolia
Hund02088 Selenicereus undatus
Hund29081 Selenicereus undatus
Hund29083 Selenicereus undatus
Lalb_Chr07g0187491 Lupinus albus
Lj2g0026207 Lotus japonicus
Lju470C11T9 Lonicera japonica
Manes.07G087200 Manihot esculenta
Manes.10G061700 Manihot esculenta
Mapoly0068s0046 Marchantia polymorpha
Mapoly0122s0023 Marchantia polymorpha
MBI07_g41269_MAGBIO Magnolia biondii
MD04G1200100 Malus domestica
MD12G1212600 Malus domestica
Medtr3g010210 Medicago truncatula
MELO3C015303.2 Cucumis melo
Migut.D00240 Erythranthe guttata
Nitab4.5_0001499g0140 Nicotiana tabacum
Nitab4.5_0004672g0030 Nicotiana tabacum
Nitab4.5_0009592g0010 Nicotiana tabacum
Nn3g21231 Nelumbo nucifera
Nn4g26080 Nelumbo nucifera
Oeu032852.1 Olea europaea
Peaxi162Scf00026g00313 Petunia axillaris
Peaxi162Scf00273g00034 Petunia axillaris
PGR119G2453 Punica granatum
PGSC0003DMG400015370 Solanum tuberosum
Phvul.002G050500 Phaseolus vulgaris
Potri.014G083500 Populus trichocarpa
Pp3c3_34830 Physcomitrium patens
Prupe.3G123100 Prunus persica
Prupe.8G250400 Prunus persica
Prupe.8G268000 Prunus persica
Psat4g228760 Pisum sativum
PSO170G2912 Papaver somniferum
PSO407G0089 Papaver somniferum
QL12p023442 Quercus lobata
QL12p042454 Quercus lobata
RcHm_v2.0_Chr6g0292311 Rosa chinensis
Sabra02G0198900 Salix brachista
SalBow3G0902 Salvia bowleyana
Sc05g0004330 Simmondsia chinensis
Sc26g0003460 Simmondsia chinensis
Sed0020474 Sechium edule
SEGI_21939 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34295 Striga asiatica
SHI14488 Sapria himalayana
SMO244G0033 Selaginella moellendorffii
Solyc12g014020.2 Solanum lycopersicum
Sopen12g005770 Solanum pennellii
Sp2g26790 Schrenkiella parvula
TAR365G0318 Trochodendron aralioides
TAR636G0052 Trochodendron aralioides
THA.LOC104826323 Tarenaya hassleriana
Thecc.01G288100 Theobroma cacao
Thhalv10005102m.g Eutrema salsugineum
TPR.G16722 Trifolium pratense
TPR.G22635 Trifolium pratense
TPR.G8807 Trifolium pratense
TWI23G1093 Tripterygium wilfordii
unitig_0.g1187 Utricularia gibba
vmacro02518 Vaccinium macrocarpon
vmacro04594 Vaccinium macrocarpon
vmacro09159 Vaccinium macrocarpon
VMungo1215G3318 Vigna mungo
Zm00001eb106990 Zea mays

User provided reference genes

Program Settings