Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G21980 Aethionema arabicum
Actinidia21332 Actinidia chinensis
Ah.04g162100 Amaranthus hybridus
Ah.06g194050 Amaranthus hybridus
AL6G12340 Arabidopsis lyrata
Aqoxy5G02874 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea
AT5G03050 Arabidopsis thaliana
ATR0019G040 Amborella trichopoda
Atru.chr5.830 Acer truncatum
AUR62000136 Chenopodium quinoa
AUR62019316 Chenopodium quinoa
BcaB05g21854 Brassica carinata
BcaC03g13034 Brassica carinata
BcaC03g13036 Brassica carinata
BcaC06g32027 Brassica carinata
BcaC06g32028 Brassica carinata
BcaNung04734 Brassica carinata
BcaNung05508 Brassica carinata
BcaNung05509 Brassica carinata
BolC2t06074H Brassica oleracea
BolC9t60100H Brassica oleracea
BolC9t60103H Brassica oleracea
BraA02t04741Z Brassica rapa
BraA10t45317Z Brassica rapa
C02p00760 Brassica napus
C09p73700 Brassica napus
CAN.G843.33 Capsicum annuum
CANSAT25G1403 Cannabis sativa
CANSAT25G3159 Cannabis sativa
CARHR210270 Cardamine hirsuta
Carub.0006s0184 Capsella rubella
Ca_10224_v3 Cicer arietinum L.
CBR_g39249 Chara braunii
Cc08_g05070 Coffea canephora
CDE01G0754 Ceratophyllum demersum
CDE12G0816 Ceratophyllum demersum
Ciclev10023548m.g Citrus clementina
CiPaw.07G127700 Carya illinoinensis
ClCG10G013240 Citrullus lanatus
COL.COLO4_23092 Corchorus olitorius
Cpa.g.sc57.50 Carica papaya
CsaV3_3G043390 Cucumis sativus L.
CSS0031729 Camellia sinensis var. sinensis
DCAR_012291 Daucus carota
DCAR_012292 Daucus carota
Dinv05504 Davidia involucrata
Duzib138G1502 Durio zibethinus
ECA238G2998 Erigeron canadensis
ECA240G1548 Erigeron canadensis
EL10Ac4g10232 Beta vulgaris
Eucgr.A00985 Eucalyptus grandis
FvH4_6g36280 Fragaria vesca
FvH4_7g03660 Fragaria vesca
Glyma.10G140400 Glycine max
Glyma.20G089200 Glycine max
Gohir.A07G132650 Gossypium hirsutum
Gohir.A12G118700 Gossypium hirsutum
Gohir.D07G136950 Gossypium hirsutum
Gohir.D12G122500 Gossypium hirsutum
Gorai.001G149000 Gossypium raimondii
Gorai.008G133300 Gossypium raimondii
GSVIVG01028268001 Vitis vinifera
HanXRQChr07g0194641 Helianthus annuus
Haze_05170 Corylus avellana
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla
HPP92_026861 Vanilla planifolia
Hund22023 Selenicereus undatus
Lalb_Chr02g0147311 Lupinus albus
Lj1C4G2 Lonicera japonica
Lj5g0024678 Lotus japonicus
Lju2566A1T37 Lonicera japonica
Lsat_1_v5_gn_2_108401 Lactuca sativa
Manes.05G006500 Manihot esculenta
Mapoly0076s0084 Marchantia polymorpha
MBI18_g03875_MAGBIO Magnolia biondii
MD17G1156700 Malus domestica
Medtr1g085355 Medicago truncatula
Medtr1g085440 Medicago truncatula
Medtr4g118050 Medicago truncatula
MELO3C026900.2 Cucumis melo
Migut.L00831 Erythranthe guttata
Migut.L00999 Erythranthe guttata
Migut.L01023 Erythranthe guttata
Nitab4.5_0001841g0090 Nicotiana tabacum
Nitab4.5_0002046g0150 Nicotiana tabacum
Nitab4.5_0002450g0080 Nicotiana tabacum
Nitab4.5_0010904g0040 Nicotiana tabacum
Nn4g25242 Nelumbo nucifera
Oeu048368.1 Olea europaea
Os03g0108700 Oryza sativa ssp. japonica
Peaxi162Scf00314g00430 Petunia axillaris
PGR042G0310 Punica granatum
PGSC0003DMG400014183 Solanum tuberosum
Phvul.007G207500 Phaseolus vulgaris
Potri.002G184600 Populus trichocarpa
Potri.014G110300 Populus trichocarpa
Pp3c25_8550 Physcomitrium patens
Prupe.3G028700 Prunus persica
Psat6g157560 Pisum sativum
PSO081G0045 Papaver somniferum
PSO170G4276 Papaver somniferum
PSO339G1810 Papaver somniferum
QL09p037524 Quercus lobata
RcHm_v2.0_Chr2g0148291 Rosa chinensis
Rhsim01G0001300 Rhododendron simsii
Sabra02G0131200 Salix brachista
Sc09g0000780 Simmondsia chinensis
Sed0018142 Sechium edule
SEGI_31615 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14563 Striga asiatica
SGA_v2.0_scaffold38G15005 Striga asiatica
SHI19776 Sapria himalayana
SMO361G0765 Selaginella moellendorffii
Solyc03g118440.3 Solanum lycopersicum
Sopen03g037330 Solanum pennellii
Sp6g39640 Schrenkiella parvula
TAR633G2394 Trochodendron aralioides
Thhalv10015298m.g Eutrema salsugineum
TPR.G2595 Trifolium pratense
TPR.G2637 Trifolium pratense
TPR.G3076 Trifolium pratense
TPR.G3097 Trifolium pratense
TWI14G0531 Tripterygium wilfordii
TWI59G0504 Tripterygium wilfordii
unitig_26.g10007 Utricularia gibba
vmacro02351 Vaccinium macrocarpon
VMungo0720G1137 Vigna mungo
Zm00001eb000680 Zea mays

User provided reference genes

Program Settings