Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p69350 Brassica napus
Aa31LG1G11510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis
Actinidia12146 Actinidia chinensis
Actinidia32500 Actinidia chinensis
Ah.16g103830 Amaranthus hybridus
AL1G10130 Arabidopsis lyrata
Aqoxy7G00862 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea
AT1G02100 Arabidopsis thaliana
ATR0057G026 Amborella trichopoda
Atru.chr5.130 Acer truncatum
AUR62013746 Chenopodium quinoa
AUR62023405 Chenopodium quinoa
BcaC07g42339 Brassica carinata
BcaC07g42437 Brassica carinata
BolC8t52925H Brassica oleracea
BraA09t42280Z Brassica rapa
C08p54160 Brassica napus
CAN.G1473.12 Capsicum annuum
CANSAT21G1800 Cannabis sativa
CANSAT21G1956 Cannabis sativa
CARHR000230 Cardamine hirsuta
Carub.0001s0012 Capsella rubella
Ca_08070_v3 Cicer arietinum L.
CBR_g29813 Chara braunii
Cc02_g25090 Coffea canephora
CDE06G0088 Ceratophyllum demersum
CDE06G0143 Ceratophyllum demersum
Cfa011074 Carpinus fangiana
Ciclev10021096m.g Citrus clementina
CiPaw.13G026500 Carya illinoinensis
ClCG06G002510 Citrullus lanatus
COL.COLO4_12412 Corchorus olitorius
Cpa.g.sc101.4 Carica papaya
Cre04.g229350 Chlamydomonas reinhardtii
CsaV3_6G008610 Cucumis sativus L.
CSS0024076 Camellia sinensis var. sinensis
CSS0048269 Camellia sinensis var. sinensis
Dinv43619 Davidia involucrata
Duzib133G1573 Durio zibethinus
Duzib138G0472 Durio zibethinus
ECA240G0951 Erigeron canadensis
ECA240G2571 Erigeron canadensis
EL10Ac1g00759 Beta vulgaris
Eucgr.D01230 Eucalyptus grandis
FAN01G2488 Fragaria x ananassa
FAN03G3321 Fragaria x ananassa
FAN06G2084 Fragaria x ananassa
FAN06G3912 Fragaria x ananassa
FAN10G0847 Fragaria x ananassa
FAN10G2268 Fragaria x ananassa
FvH4_7g10160 Fragaria vesca
Glyma.09G242700 Glycine max
Glyma.13G187100 Glycine max
Glyma.18G252000 Glycine max
Gohir.A08G029400 Gossypium hirsutum
Gohir.A09G116600 Gossypium hirsutum
Gohir.D08G040100 Gossypium hirsutum
Gohir.D08G159633 Gossypium hirsutum
Gorai.004G039000 Gossypium raimondii
GSVIVG01018274001 Vitis vinifera
HanXRQChr13g0423211 Helianthus annuus
Haze_02842 Corylus avellana
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla
HPP92_022088 Vanilla planifolia
Hund17088 Selenicereus undatus
Lalb_Chr13g0290591 Lupinus albus
Lj1g0005705 Lotus japonicus
Lj9C557T10 Lonicera japonica
Lsat_1_v5_gn_3_127241 Lactuca sativa
Manes.05G054600 Manihot esculenta
Mapoly0013s0063 Marchantia polymorpha
MBI04_g33722_MAGBIO Magnolia biondii
MCO09G792 Micromonas commoda
MD02G1211800 Malus domestica
MD02G1212000 Malus domestica
MD07G1108400 Malus domestica
Medtr7g081715 Medicago truncatula
MELO3C022277.2 Cucumis melo
Migut.N01738 Erythranthe guttata
MSTRG.28152 Avicennia marina
Nitab4.5_0000920g0150 Nicotiana tabacum
Nitab4.5_0013736g0020 Nicotiana tabacum
Nn1g00856 Nelumbo nucifera
Oeu011253.1 Olea europaea
Os06g0140100 Oryza sativa ssp. japonica
Peaxi162Scf00475g00522 Petunia axillaris
PGR004G2446 Punica granatum
PGR144G0002 Punica granatum
Phvul.008G046701 Phaseolus vulgaris
Phvul.011G190400 Phaseolus vulgaris
Potri.014G047300 Populus trichocarpa
Pp3c6_20710 Physcomitrium patens
PRCOL_00000228 Prasinoderma coloniale
Prupe.2G131200 Prunus persica
Psat0s3739g0040 Pisum sativum
PSO063G7218 Papaver somniferum
PSO832G3098 Papaver somniferum
QL04p030364 Quercus lobata
RcHm_v2.0_Chr1g0347871 Rosa chinensis
Rhsim07G0035700 Rhododendron simsii
Sabra14G0034300 Salix brachista
SalBow5G1596 Salvia bowleyana
SalBow5G4451 Salvia bowleyana
Sc02g0003100 Simmondsia chinensis
Sed0027680 Sechium edule
SEGI_37557 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32294 Striga asiatica
SGA_v2.0_scaffold43G16538 Striga asiatica
SHI13613 Sapria himalayana
SHI13615 Sapria himalayana
SMO169G0267 Selaginella moellendorffii
Solyc01g090280.4 Solanum lycopersicum
Sopen01g036070 Solanum pennellii
Sp1g00170 Schrenkiella parvula
TAR375G0976 Trochodendron aralioides
Thecc.01G394500 Theobroma cacao
Thhalv10008126m.g Eutrema salsugineum
TPR.G14105 Trifolium pratense
TWI14G0600 Tripterygium wilfordii
TWI14G1276 Tripterygium wilfordii
unitig_578.g16712 Utricularia gibba
vmacro13494 Vaccinium macrocarpon
VMungo0647G2535 Vigna mungo
VMungo1127G0075 Vigna mungo
Zm00001eb270250 Zea mays
Zm00001eb438620 Zea mays

User provided reference genes

Program Settings