Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p51180 Brassica napus
Aa31LG6G960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis
Actinidia19520 Actinidia chinensis
Ah.09g232650 Amaranthus hybridus
AL7G36120 Arabidopsis lyrata
Aqoxy4G00089 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea
AT4G18270 Arabidopsis thaliana
ATR0044G011 Amborella trichopoda
Atru.chr10.1253 Acer truncatum
AUR62027517 Chenopodium quinoa
AUR62030211 Chenopodium quinoa
AUR62030212 Chenopodium quinoa
BcaNung05669 Brassica carinata
BolC7t45462H Brassica oleracea
BraA03t14200Z Brassica rapa
C07p49580 Brassica napus
CAN.G650.1 Capsicum annuum
CARHR225070 Cardamine hirsuta
Carub.0007s2300 Capsella rubella
Carub.0007s2301 Capsella rubella
Ca_00551_v3 Cicer arietinum L.
CBR_g3965 Chara braunii
Cc09_g09460 Coffea canephora
Ciclev10017950m.g Citrus clementina
CiPaw.09G124900 Carya illinoinensis
ClCG03G007090 Citrullus lanatus
COL.COLO4_31087 Corchorus olitorius
COL.COLO4_31088 Corchorus olitorius
Cpa.g.sc166.16 Carica papaya
Cpa.g.sc166.17 Carica papaya
Cpa.g.sc166.18 Carica papaya
CsaV3_1G032660 Cucumis sativus L.
CSS0017405 Camellia sinensis var. sinensis
CSS0030855 Camellia sinensis var. sinensis
CSS0036908 Camellia sinensis var. sinensis
CSS0038270 Camellia sinensis var. sinensis
CSS0043541 Camellia sinensis var. sinensis
DCAR_003921 Daucus carota
DCAR_011844 Daucus carota
DCAR_029765 Daucus carota
Dinv30732 Davidia involucrata
Duzib192G0778 Durio zibethinus
Duzib235G1544 Durio zibethinus
ECA248G2274 Erigeron canadensis
EL10Ac8g19724 Beta vulgaris
Eucgr.D00300 Eucalyptus grandis
FAN11G0378 Fragaria x ananassa
FAN16G0730 Fragaria x ananassa
FAN21G0460 Fragaria x ananassa
FAN25G0090 Fragaria x ananassa
FvH4_3g05710 Fragaria vesca
FvH4_3g05720 Fragaria vesca
Glyma.13G217500 Glycine max
Glyma.15G094900 Glycine max
Gohir.A05G149000 Gossypium hirsutum
Gohir.A10G040000 Gossypium hirsutum
Gohir.D05G151500 Gossypium hirsutum
Gohir.D10G040800 Gossypium hirsutum
Gorai.009G155500 Gossypium raimondii
Gorai.011G043000 Gossypium raimondii
GSVIVG01021436001 Vitis vinifera
HanXRQChr02g0047351 Helianthus annuus
Haze_05583 Corylus avellana
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla
HPP92_008747 Vanilla planifolia
HPP92_021321 Vanilla planifolia
Lalb_Chr18g0055521 Lupinus albus
Lalb_Chr18g0055531 Lupinus albus
Lj2C306G12 Lonicera japonica
Lj6g0009694 Lotus japonicus
Lsat_1_v5_gn_1_97741 Lactuca sativa
Manes.17G069500 Manihot esculenta
Mapoly0001s0010 Marchantia polymorpha
Mapoly0042s0029 Marchantia polymorpha
MBI10_g02215_MAGBIO Magnolia biondii
MBI10_g02216_MAGBIO Magnolia biondii
MCO07G478 Micromonas commoda
MD05G1284800 Malus domestica
MD10G1263200 Malus domestica
Medtr2g019630 Medicago truncatula
MELO3C002716.2 Cucumis melo
Migut.M00918 Erythranthe guttata
Nitab4.5_0002275g0100 Nicotiana tabacum
Nitab4.5_0009607g0030 Nicotiana tabacum
Nn3g20737 Nelumbo nucifera
Oeu052380.1 Olea europaea
Os01g0210800 Oryza sativa ssp. japonica
Peaxi162Scf00170g00718 Petunia axillaris
PGR083G2192 Punica granatum
PGSC0003DMG401021159 Solanum tuberosum
PGSC0003DMG402021159 Solanum tuberosum
PGSC0003DMG403021159 Solanum tuberosum
Phvul.006G163900 Phaseolus vulgaris
Potri.011G080600 Populus trichocarpa
Pp3c6_19460 Physcomitrium patens
PRCOL_00000982 Prasinoderma coloniale
Prupe.4G079600 Prunus persica
Psat1g190800 Pisum sativum
PSO017G0250 Papaver somniferum
PSO063G2775 Papaver somniferum
PSO170G3783 Papaver somniferum
QL05p058532 Quercus lobata
RcHm_v2.0_Chr5g0013951 Rosa chinensis
Rhsim13G0194500 Rhododendron simsii
Sabra11G0067500 Salix brachista
Sabra11G0069700 Salix brachista
SalBow8G2368 Salvia bowleyana
Sc05g0006350 Simmondsia chinensis
Sed0022060 Sechium edule
SEGI_20862 Sequoiadendron giganteum
SEGI_21633 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00164 Striga asiatica
SMO239G0146 Selaginella moellendorffii
Solyc02g070560.3 Solanum lycopersicum
Sopen02g019650 Solanum pennellii
Sp7g15790 Schrenkiella parvula
TAR627G0203 Trochodendron aralioides
THA.LOC104812850 Tarenaya hassleriana
Thecc.06G151800 Theobroma cacao
Thhalv10025036m.g Eutrema salsugineum
TPR.G28613 Trifolium pratense
TWI73G0574 Tripterygium wilfordii
unitig_32.g11518 Utricularia gibba
vmacro04186 Vaccinium macrocarpon
vmacro04187 Vaccinium macrocarpon
VMungo0540G2452 Vigna mungo
Zm00001eb120180 Zea mays

User provided reference genes

Program Settings