Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia13628 Actinidia chinensis
Actinidia31646 Actinidia chinensis
Actinidia31647 Actinidia chinensis
Ah.12g064770 Amaranthus hybridus
Aqoxy2G00664 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60BNXM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7873Y Arachis hypogaea
ATR1127G015 Amborella trichopoda
Atru.chr12.223 Acer truncatum
Atru.chr12.224 Acer truncatum
AUR62031674 Chenopodium quinoa
AUR62032558 Chenopodium quinoa
CAN.G174.3 Capsicum annuum
CAN.G297.3 Capsicum annuum
CAN.G897.10 Capsicum annuum
CANSAT56G0215 Cannabis sativa
Ca_16844_v3 Cicer arietinum L.
Cc02_g04990 Coffea canephora
CDE04G0973 Ceratophyllum demersum
CDE06G0625 Ceratophyllum demersum
CDE06G1642 Ceratophyllum demersum
CDE06G2498 Ceratophyllum demersum
CDE07G1544 Ceratophyllum demersum
Cfa001175 Carpinus fangiana
Ciclev10030611m.g Citrus clementina
CiPaw.02G199600 Carya illinoinensis
ClCG07G005350 Citrullus lanatus
COL.COLO4_19501 Corchorus olitorius
Cpa.g.sc19.31 Carica papaya
CsaV3_5G011180 Cucumis sativus L.
CSS0012358 Camellia sinensis var. sinensis
CSS0039931 Camellia sinensis var. sinensis
DCAR_020159 Daucus carota
Dinv21874 Davidia involucrata
Duzib066G0004 Durio zibethinus
Duzib114G0134 Durio zibethinus
Duzib128G1198 Durio zibethinus
ECA232G0668 Erigeron canadensis
ECA233G0496 Erigeron canadensis
EL10Ac2g02699 Beta vulgaris
EL10Ac5g11358 Beta vulgaris
EL10Ac7g17674 Beta vulgaris
Eucgr.G03175 Eucalyptus grandis
FAN01G2405 Fragaria x ananassa
FAN03G1380 Fragaria x ananassa
FAN03G1769 Fragaria x ananassa
FAN03G2132 Fragaria x ananassa
FAN03G2503 Fragaria x ananassa
FAN03G3258 Fragaria x ananassa
FAN06G4040 Fragaria x ananassa
FvH4_7g26360 Fragaria vesca
Glyma.04G225000 Glycine max
Glyma.06G139800 Glycine max
Gohir.A10G177200 Gossypium hirsutum
Gohir.A13G008800 Gossypium hirsutum
Gohir.D10G183800 Gossypium hirsutum
Gohir.D13G009500 Gossypium hirsutum
Gorai.011G206000 Gossypium raimondii
Gorai.013G010200 Gossypium raimondii
GSVIVG01032875001 Vitis vinifera
HanXRQChr08g0223291 Helianthus annuus
HanXRQChr09g0252341 Helianthus annuus
HanXRQChr14g0461001 Helianthus annuus
Haze_17386 Corylus avellana
Haze_17387 Corylus avellana
Hma1.2p1_0264F.1_g105720 Hydrangea macrophylla
HPP92_006686 Vanilla planifolia
Hund13421 Selenicereus undatus
Hund15773 Selenicereus undatus
Lalb_Chr08g0239361 Lupinus albus
Lalb_Chr11g0067581 Lupinus albus
Lalb_Chr23g0272071 Lupinus albus
Lalb_Chr23g0272081 Lupinus albus
Lj1A971T59 Lonicera japonica
Lj1g0003515 Lotus japonicus
Lsat_1_v5_gn_8_10841 Lactuca sativa
Lsat_1_v5_gn_9_60500 Lactuca sativa
Manes.10G001760 Manihot esculenta
MBI03_g15319_MAGBIO Magnolia biondii
MD01G1172700 Malus domestica
MD01G1179000 Malus domestica
MD07G1239000 Malus domestica
Medtr3g093470 Medicago truncatula
MELO3C020181.2 Cucumis melo
Migut.F00558 Erythranthe guttata
MSTRG.27246 Avicennia marina
Nitab4.5_0000071g0320 Nicotiana tabacum
Nitab4.5_0000103g0050 Nicotiana tabacum
Nitab4.5_0001130g0010 Nicotiana tabacum
Nitab4.5_0005479g0030 Nicotiana tabacum
Nn5g26751 Nelumbo nucifera
Oeu001366.1 Olea europaea
Oeu023789.1 Olea europaea
Os03g0330300 Oryza sativa ssp. japonica
Peaxi162Scf00073g02032 Petunia axillaris
Peaxi162Scf00304g00826 Petunia axillaris
PGR031G3628 Punica granatum
PGSC0003DMG400027591 Solanum tuberosum
PGSC0003DMG401005259 Solanum tuberosum
Phvul.009G041000 Phaseolus vulgaris
Potri.013G091900 Populus trichocarpa
Potri.019G064000 Populus trichocarpa
Prupe.2G267800 Prunus persica
Psat5g070360 Pisum sativum
PSO339G0528 Papaver somniferum
PSO384G4511 Papaver somniferum
QL08p065409 Quercus lobata
RcHm_v2.0_Chr1g0372921 Rosa chinensis
Sabra19G0077200 Salix brachista
Sabra19G0079600 Salix brachista
SalBow3G1545 Salvia bowleyana
Sc11g0006140 Simmondsia chinensis
Sed0014301 Sechium edule
Sed0023048 Sechium edule
SGA_v2.0_scaffold60G20868 Striga asiatica
Solyc03g095250.3 Solanum lycopersicum
Solyc06g048470.4 Solanum lycopersicum
Sopen03g025250 Solanum pennellii
Sopen06g014620 Solanum pennellii
TAR633G2188 Trochodendron aralioides
Thecc.10G188200 Theobroma cacao
TPR.G13971 Trifolium pratense
TWI53G0196 Tripterygium wilfordii
TWI73G0405 Tripterygium wilfordii
unitig_37.g12478 Utricularia gibba
unitig_46.g18754 Utricularia gibba
unitig_46.g18755 Utricularia gibba
vmacro06870 Vaccinium macrocarpon
VMungo1309G1404 Vigna mungo
Zm00001eb395270 Zea mays

User provided reference genes

Program Settings