Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00550 Brassica napus
A10p33460 Brassica napus
Aa31LG1G22600 Aethionema arabicum
AL6G11360 Arabidopsis lyrata
Aqoxy1G00880 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AC67KC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea
AT5G02130 Arabidopsis thaliana
ATR0559G357 Amborella trichopoda
Atru.chr8.2013 Acer truncatum
AUR62018119 Chenopodium quinoa
AUR62034450 Chenopodium quinoa
BcaB01g06067 Brassica carinata
BcaB01g06214 Brassica carinata
BolC3t12644H Brassica oleracea
BolC9t60170H Brassica oleracea
BraA03t09445Z Brassica rapa
BraA10t45376Z Brassica rapa
C03p00810 Brassica napus
C09p74360 Brassica napus
CAN.G597.3 Capsicum annuum
CANSAT35G0136 Cannabis sativa
CARHR211230 Cardamine hirsuta
Carub.0006s0097 Capsella rubella
Ca_07336_v3 Cicer arietinum L.
CBR_g8766 Chara braunii
Cc06_g02350 Coffea canephora
CDE06G1975 Ceratophyllum demersum
Cfa017339 Carpinus fangiana
Ciclev10011734m.g Citrus clementina
CiPaw.09G195700 Carya illinoinensis
CiPaw.09G197100 Carya illinoinensis
ClCG10G021320 Citrullus lanatus
COL.COLO4_14760 Corchorus olitorius
COL.COLO4_14761 Corchorus olitorius
Cpa.g.sc169.5 Carica papaya
Cre17.g702800 Chlamydomonas reinhardtii
CsaV3_3G034720 Cucumis sativus L.
CSS0032526 Camellia sinensis var. sinensis
DCAR_028758 Daucus carota
Dinv35575 Davidia involucrata
Duzib106G0862 Durio zibethinus
ECA248G0328 Erigeron canadensis
EL10Ac2g03023 Beta vulgaris
Eucgr.K03104 Eucalyptus grandis
FAN02G2147 Fragaria x ananassa
FAN05G2873 Fragaria x ananassa
FAN14G1932 Fragaria x ananassa
FvH4_6g13250 Fragaria vesca
Glyma.07G135200 Glycine max
Glyma.07G135250 Glycine max
Glyma.10G191650 Glycine max
Glyma.18G185200 Glycine max
Gohir.A04G065300 Gossypium hirsutum
Gohir.A04G065314 Gossypium hirsutum
Gohir.D04G102700 Gossypium hirsutum
Gorai.009G406000 Gossypium raimondii
GSVIVG01034130001 Vitis vinifera
HanXRQChr13g0406931 Helianthus annuus
Haze_20828 Corylus avellana
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla
Hma1.2p1_0877F.1_g231710 Hydrangea macrophylla
HPP92_014298 Vanilla planifolia
HPP92_014299 Vanilla planifolia
Hund15247 Selenicereus undatus
Lalb_Chr03g0042401 Lupinus albus
Lj1g0013519 Lotus japonicus
Lj3A965G74 Lonicera japonica
Lj3g0020199 Lotus japonicus
Lsat_1_v5_gn_5_154000 Lactuca sativa
Manes.09G092411 Manihot esculenta
Mapoly0002s0152 Marchantia polymorpha
MBI14_g08020_MAGBIO Magnolia biondii
MD04G1132700 Malus domestica
MD07G1261700 Malus domestica
MD12G1145400 Malus domestica
Medtr2g093870 Medicago truncatula
Medtr4g078800 Medicago truncatula
Medtr6g445490 Medicago truncatula
Medtr7g062630 Medicago truncatula
Medtr7g062690 Medicago truncatula
MELO3C009242.2 Cucumis melo
Migut.J00307 Erythranthe guttata
MSTRG.19073 Avicennia marina
Nitab4.5_0000705g0060 Nicotiana tabacum
Nitab4.5_0003394g0010 Nicotiana tabacum
Nn2g11183 Nelumbo nucifera
Oeu010102.1 Olea europaea
Os05g0457700 Oryza sativa ssp. japonica
Peaxi162Scf00527g00742 Petunia axillaris
PGR004G1833 Punica granatum
PGSC0003DMG400008825 Solanum tuberosum
Phvul.008G118100 Phaseolus vulgaris
Potri.002G091400 Populus trichocarpa
Pp3c17_13640 Physcomitrium patens
Prupe.6G259100 Prunus persica
Psat3g136040 Pisum sativum
PSO063G1044 Papaver somniferum
PSO339G1759 Papaver somniferum
PSO339G4427 Papaver somniferum
QL07p030118 Quercus lobata
QL07p030894 Quercus lobata
RcHm_v2.0_Chr3g0466081 Rosa chinensis
Rhsim04G0158800 Rhododendron simsii
Rhsim04G0160900 Rhododendron simsii
Sabra02G0072200 Salix brachista
SalBow1G6939 Salvia bowleyana
Sc22g0004440 Simmondsia chinensis
Sed0026133 Sechium edule
SEGI_25878 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33761 Striga asiatica
SHI12713 Sapria himalayana
SMO361G0160 Selaginella moellendorffii
SMO361G0306 Selaginella moellendorffii
Solyc09g011020.4 Solanum lycopersicum
Sopen09g005740 Solanum pennellii
Sp6g40310 Schrenkiella parvula
TAR623G1560 Trochodendron aralioides
THA.LOC104816254 Tarenaya hassleriana
Thecc.05G035700 Theobroma cacao
Thhalv10013663m.g Eutrema salsugineum
Thhalv10015964m.g Eutrema salsugineum
TPR.G18356 Trifolium pratense
TPR.G40448 Trifolium pratense
TWI77G0138 Tripterygium wilfordii
unitig_21.g21014 Utricularia gibba
vmacro08642 Vaccinium macrocarpon
VMungo1383G2703 Vigna mungo
Zm00001eb351230 Zea mays

User provided reference genes

Program Settings