Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35730 Brassica napus
A05p39030 Brassica napus
Aa31LG3G2550 Aethionema arabicum
Ah.08g211020 Amaranthus hybridus
AL3G21330 Arabidopsis lyrata
Aqoxy1G00961 Aquilegia oxysepala
Aqoxy2G01470 Aquilegia oxysepala
AT3G10020 Arabidopsis thaliana
Atru.chr8.1654 Acer truncatum
AUR62033593 Chenopodium quinoa
AUR62037886 Chenopodium quinoa
BcaB03g11578 Brassica carinata
BcaC01g04256 Brassica carinata
BcaC03g16179 Brassica carinata
BcaC05g29726 Brassica carinata
BolC2t09966H Brassica oleracea
BolC3t16611H Brassica oleracea
BolC5t34462H Brassica oleracea
BolC8t51238H Brassica oleracea
BraA03t12747Z Brassica rapa
BraA05t22694Z Brassica rapa
C02p39530 Brassica napus
C03p43400 Brassica napus
C04p63450 Brassica napus
C07p58330 Brassica napus
C08p36560 Brassica napus
CAN.G824.34 Capsicum annuum
CANSAT80G1206 Cannabis sativa
CARHR084520 Cardamine hirsuta
Carub.0003s0912 Capsella rubella
Ca_08959_v3 Cicer arietinum L.
Cc00_g05260 Coffea canephora
Cc00_g32800 Coffea canephora
Cc06_g05110 Coffea canephora
Cfa016525 Carpinus fangiana
Ciclev10013017m.g Citrus clementina
CiPaw.10G004600 Carya illinoinensis
ClCG10G019450 Citrullus lanatus
COL.COLO4_29832 Corchorus olitorius
Cpa.g.sc5.89 Carica papaya
CsaV3_3G036730 Cucumis sativus L.
CSS0040940 Camellia sinensis var. sinensis
DCAR_009167 Daucus carota
Dinv21268 Davidia involucrata
Duzib093G0521 Durio zibethinus
Duzib106G1072 Durio zibethinus
ECA126G0006 Erigeron canadensis
EL10Ac7g17005 Beta vulgaris
Eucgr.A01560 Eucalyptus grandis
Eucgr.K02384 Eucalyptus grandis
Eucgr.K02389 Eucalyptus grandis
Eucgr.K02399 Eucalyptus grandis
Eucgr.K02410 Eucalyptus grandis
FAN02G0054 Fragaria x ananassa
FvH4_6g17700 Fragaria vesca
Glyma.03G190100 Glycine max
Glyma.19G190400 Glycine max
Gohir.A04G066428 Gossypium hirsutum
Gohir.A09G136312 Gossypium hirsutum
Gohir.D04G105000 Gossypium hirsutum
Gohir.D09G138000 Gossypium hirsutum
Gorai.006G158600 Gossypium raimondii
Gorai.009G408700 Gossypium raimondii
HanXRQChr09g0259401 Helianthus annuus
Haze_19524 Corylus avellana
HPP92_021571 Vanilla planifolia
Lalb_Chr20g0112261 Lupinus albus
Lj1g0027910 Lotus japonicus
Lj2P127T74 Lonicera japonica
Lj4P368T6 Lonicera japonica
Lsat_1_v5_gn_2_22321 Lactuca sativa
Manes.08G019800 Manihot esculenta
Mapoly0058s0037 Marchantia polymorpha
Mapoly0162s0011 Marchantia polymorpha
MBI01_g32535_MAGBIO Magnolia biondii
MD12G1016000 Malus domestica
MD14G1014200 Malus domestica
Medtr7g103520 Medicago truncatula
MELO3C009427.2 Cucumis melo
Nitab4.5_0001922g0090 Nicotiana tabacum
Nitab4.5_0010125g0030 Nicotiana tabacum
Nitab4.5_0010125g0040 Nicotiana tabacum
Nn1g08859 Nelumbo nucifera
Nn2g13971 Nelumbo nucifera
Nn6g35076 Nelumbo nucifera
Oeu023852.1 Olea europaea
Oeu030483.1 Olea europaea
Oeu040545.1 Olea europaea
Os11g0149200 Oryza sativa ssp. japonica
Os12g0147200 Oryza sativa ssp. japonica
Peaxi162Scf00412g00063 Petunia axillaris
Peaxi162Scf00412g00073 Petunia axillaris
PGR004G1627 Punica granatum
PGSC0003DMG400002723 Solanum tuberosum
PGSC0003DMG400002724 Solanum tuberosum
Phvul.001G185700 Phaseolus vulgaris
Potri.013G014300 Populus trichocarpa
Prupe.7G091800 Prunus persica
Prupe.7G119300 Prunus persica
Psat3g036320 Pisum sativum
PSO384G2483 Papaver somniferum
QL07p040748 Quercus lobata
RcHm_v2.0_Chr3g0471911 Rosa chinensis
Rhsim06G0171100 Rhododendron simsii
SalBow3G1044 Salvia bowleyana
Sc07g0005350 Simmondsia chinensis
Sed0027852 Sechium edule
SEGI_20897 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15419 Striga asiatica
SMO347G0034 Selaginella moellendorffii
SMO358G0245 Selaginella moellendorffii
Solyc09g008970.1 Solanum lycopersicum
Solyc09g008980.2 Solanum lycopersicum
Sopen09g003730 Solanum pennellii
Sopen09g003740 Solanum pennellii
Sp3g08330 Schrenkiella parvula
TAR334G0001 Trochodendron aralioides
TAR369G1076 Trochodendron aralioides
THA.LOC104816380 Tarenaya hassleriana
THA.LOC104823222 Tarenaya hassleriana
Thecc.05G079900 Theobroma cacao
Thhalv10021699m.g Eutrema salsugineum
TPR.G7024 Trifolium pratense
TWI13G0012 Tripterygium wilfordii
TWI53G1797 Tripterygium wilfordii
TWI74G0769 Tripterygium wilfordii
vmacro12136 Vaccinium macrocarpon
VMungo1383G3657 Vigna mungo
Zm00001eb227120 Zea mays
Zm00001eb406490 Zea mays

User provided reference genes

Program Settings