Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p19810 Brassica napus
Aa31LG9G16960 Aethionema arabicum
Actinidia26288 Actinidia chinensis
AL7G51880 Arabidopsis lyrata
Aqoxy3G03922 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea
AT5G38660 Arabidopsis thaliana
ATR0589G121 Amborella trichopoda
Atru.chr8.825 Acer truncatum
AUR62008965 Chenopodium quinoa
AUR62014538 Chenopodium quinoa
BcaB02g07998 Brassica carinata
BcaC02g09662 Brassica carinata
BcaC05g29172 Brassica carinata
BcaC08g44400 Brassica carinata
BolC3t18613H Brassica oleracea
BolC4t26112H Brassica oleracea
BolC5t30891H Brassica oleracea
BolC6t37045H Brassica oleracea
BraA07t29682Z Brassica rapa
C02p54890 Brassica napus
C04p45290 Brassica napus
C06p18330 Brassica napus
CAN.G995.2 Capsicum annuum
CANSAT64G1085 Cannabis sativa
CARHR214100 Cardamine hirsuta
CARHR262580 Cardamine hirsuta
Carub.0007s3720 Capsella rubella
Ca_26178_v3 Cicer arietinum L.
Ca_30067_v3 Cicer arietinum L.
CBR_g44937 Chara braunii
Cc07_g09000 Coffea canephora
CDE09G0042 Ceratophyllum demersum
Cfa007944 Carpinus fangiana
Ciclev10012434m.g Citrus clementina
CiPaw.03G059800 Carya illinoinensis
ClCG11G005350 Citrullus lanatus
Cpa.g.sc179.22 Carica papaya
Cpa.g.sc179.23 Carica papaya
Cpa.g.sc179.24 Carica papaya
Cre16.g665250 Chlamydomonas reinhardtii
CsaV3_5G039130 Cucumis sativus L.
CSS0008868 Camellia sinensis var. sinensis
DCAR_009854 Daucus carota
Dinv34847 Davidia involucrata
Duzib138G1312 Durio zibethinus
ECA232G3341 Erigeron canadensis
EL10Ac2g04605 Beta vulgaris
Eucgr.F02481 Eucalyptus grandis
FAN02G0945 Fragaria x ananassa
FAN05G0122 Fragaria x ananassa
FAN09G0627 Fragaria x ananassa
FAN14G4491 Fragaria x ananassa
FvH4_6g45340 Fragaria vesca
Glyma.19G045600 Glycine max
Gohir.A11G162500 Gossypium hirsutum
Gohir.D11G168732 Gossypium hirsutum
Gorai.007G180300 Gossypium raimondii
GSVIVG01026074001 Vitis vinifera
GSVIVG01027526001 Vitis vinifera
GSVIVG01036442001 Vitis vinifera
HanXRQChr14g0438681 Helianthus annuus
Haze_14130 Corylus avellana
Haze_14131 Corylus avellana
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla
HPP92_008047 Vanilla planifolia
Hund16127 Selenicereus undatus
Lalb_Chr06g0174661 Lupinus albus
Lj2C447G3 Lonicera japonica
Lj2g0022623 Lotus japonicus
Lsat_1_v5_gn_4_153081 Lactuca sativa
Manes.02G066700 Manihot esculenta
Mapoly0019s0052 Marchantia polymorpha
MBI09_g40289_MAGBIO Magnolia biondii
MBI09_g41181_MAGBIO Magnolia biondii
MCO16G088 Micromonas commoda
MD09G1084900 Malus domestica
MD17G1074400 Malus domestica
Medtr6g017260 Medicago truncatula
MELO3C022088.2 Cucumis melo
Migut.H00201 Erythranthe guttata
MSTRG.2747 Avicennia marina
Nitab4.5_0002489g0020 Nicotiana tabacum
Nitab4.5_0004721g0010 Nicotiana tabacum
Nn3g17761 Nelumbo nucifera
Oeu030760.1 Olea europaea
Os08g0359000 Oryza sativa ssp. japonica
Peaxi162Scf00104g00074 Petunia axillaris
Peaxi162Scf00751g00624 Petunia axillaris
PGR004G1523 Punica granatum
PGSC0003DMG400019582 Solanum tuberosum
Phvul.004G063000 Phaseolus vulgaris
Potri.004G102100 Populus trichocarpa
Potri.017G112700 Populus trichocarpa
Pp3c4_3720 Physcomitrium patens
PRCOL_00000779 Prasinoderma coloniale
Prupe.3G239600 Prunus persica
Psat1g013000 Pisum sativum
PSO063G0034 Papaver somniferum
PSO782G1563 Papaver somniferum
QL02p052540 Quercus lobata
QL02p057613 Quercus lobata
RcHm_v2.0_Chr2g0163121 Rosa chinensis
Rhsim08G0079500 Rhododendron simsii
Sabra04G0078300 Salix brachista
Sabra17G0093400 Salix brachista
SalBow3G2575 Salvia bowleyana
SalBow3G3727 Salvia bowleyana
Sc10g0001330 Simmondsia chinensis
Sed0018352 Sechium edule
SEGI_07967 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18090 Striga asiatica
SMO232G0004 Selaginella moellendorffii
Solyc03g034170.4 Solanum lycopersicum
Sopen03g006950 Solanum pennellii
Sp1g29720 Schrenkiella parvula
TAR278G0002 Trochodendron aralioides
THA.LOC104805550 Tarenaya hassleriana
Thecc.04G137400 Theobroma cacao
Thhalv10027870m.g Eutrema salsugineum
TPR.G32447 Trifolium pratense
TWI53G1226 Tripterygium wilfordii
unitig_0.g10 Utricularia gibba
unitig_0.g9 Utricularia gibba
vmacro18106 Vaccinium macrocarpon
VMungo0464G0819 Vigna mungo
VMungo0464G1707 Vigna mungo
Zm00001eb042940 Zea mays

User provided reference genes

Program Settings