Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35530 Brassica napus
Aa31LG11G3920 Aethionema arabicum
Actinidia18692 Actinidia chinensis
AL6G36290 Arabidopsis lyrata
Aqoxy3G00220 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53C9AK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QSB9JP Arachis hypogaea
AT5G24680 Arabidopsis thaliana
ATR0579G018 Amborella trichopoda
Atru.chr12.2497 Acer truncatum
Atru.chr12.2521 Acer truncatum
AUR62005943 Chenopodium quinoa
AUR62028121 Chenopodium quinoa
BcaNung01250 Brassica carinata
BolC7t44830H Brassica oleracea
BraA06t26478Z Brassica rapa
C07p43010 Brassica napus
CAN.G65.140 Capsicum annuum
CANSAT21G0186 Cannabis sativa
CARHR188790 Cardamine hirsuta
Carub.0006s2254 Capsella rubella
Ca_05537_v3 Cicer arietinum L.
Ca_16841_v3 Cicer arietinum L.
CBR_g29958 Chara braunii
Cc02_g00560 Coffea canephora
CDE04G3558 Ceratophyllum demersum
Cfa018660 Carpinus fangiana
ClCG02G007980 Citrullus lanatus
Cpa.g.sc3.191 Carica papaya
Cre05.g240500 Chlamydomonas reinhardtii
CsaV3_2G035690 Cucumis sativus L.
CSS0020482 Camellia sinensis var. sinensis
DCAR_010554 Daucus carota
Dinv29187 Davidia involucrata
Duzib068G0842 Durio zibethinus
ECA238G4129 Erigeron canadensis
EL10Ac3g05126 Beta vulgaris
Eucgr.A00979 Eucalyptus grandis
FAN01G0445 Fragaria x ananassa
FAN03G3503 Fragaria x ananassa
FAN06G3790 Fragaria x ananassa
FAN10G2970 Fragaria x ananassa
FAN10G3876 Fragaria x ananassa
FAN20G2114 Fragaria x ananassa
FvH4_7g32290 Fragaria vesca
FvH4_7g33360 Fragaria vesca
FvH4_7g33361 Fragaria vesca
FvH4_7g33700 Fragaria vesca
Glyma.02G220600 Glycine max
Glyma.04G225400 Glycine max
Glyma.06G139400 Glycine max
Glyma.14G187200 Glycine max
Gohir.A08G107000 Gossypium hirsutum
Gohir.D08G118000 Gossypium hirsutum
Gorai.004G126800 Gossypium raimondii
GSVIVG01038686001 Vitis vinifera
HanXRQChr14g0463001 Helianthus annuus
Haze_00002 Corylus avellana
Hma1.2p1_1235F.1_g269220 Hydrangea macrophylla
HPP92_012812 Vanilla planifolia
Hund21080 Selenicereus undatus
Lalb_Chr08g0239381 Lupinus albus
Lalb_Chr10g0102951 Lupinus albus
Lalb_Chr14g0364691 Lupinus albus
Lj1g0004094 Lotus japonicus
Lj3C891T14 Lonicera japonica
LjContig00155g0021870 Lotus japonicus
Lsat_1_v5_gn_8_36881 Lactuca sativa
Manes.05G196800 Manihot esculenta
Mapoly0044s0025 Marchantia polymorpha
Mapoly0088s0074 Marchantia polymorpha
MBI12_g33183_MAGBIO Magnolia biondii
MD01G1231800 Malus domestica
MD01G1231900 Malus domestica
MD07G1303900 Malus domestica
Medtr3g093420 Medicago truncatula
Medtr5g068730 Medicago truncatula
MELO3C024776.2 Cucumis melo
Migut.F00965 Erythranthe guttata
MSTRG.18 Avicennia marina
Nitab4.5_0000115g0200 Nicotiana tabacum
Nitab4.5_0003012g0150 Nicotiana tabacum
Oeu063747.1 Olea europaea
Os02g0106700 Oryza sativa ssp. japonica
Peaxi162Scf00815g00228 Petunia axillaris
PGR042G3864 Punica granatum
PGSC0003DMG400026928 Solanum tuberosum
Phvul.008G187700 Phaseolus vulgaris
Phvul.009G040600 Phaseolus vulgaris
Potri.012G004300 Populus trichocarpa
Pp3c12_6120 Physcomitrium patens
Pp3c13_14780 Physcomitrium patens
Pp3c20_10180 Physcomitrium patens
Pp3c23_1100 Physcomitrium patens
Pp3c25_2290 Physcomitrium patens
Prupe.2G322500 Prunus persica
Psat2g061600 Pisum sativum
Psat5g070440 Pisum sativum
PSO017G1458 Papaver somniferum
PSO063G2217 Papaver somniferum
QL01p000066 Quercus lobata
RcHm_v2.0_Chr1g0383341 Rosa chinensis
Rhsim09G0211300 Rhododendron simsii
Sabra12G0000200 Salix brachista
SalBow2G1501 Salvia bowleyana
Sc25g0001060 Simmondsia chinensis
Sed0006638 Sechium edule
SEGI_00936 Sequoiadendron giganteum
SEGI_38707 Sequoiadendron giganteum
SEGI_39404 Sequoiadendron giganteum
SEGI_40721 Sequoiadendron giganteum
SGA_v2.0_scaffold59G20786 Striga asiatica
SMO347G0626 Selaginella moellendorffii
Solyc06g072970.3 Solanum lycopersicum
Sopen06g029320 Solanum pennellii
Sp2g22720 Schrenkiella parvula
TAR375G0263 Trochodendron aralioides
THA.LOC104798996 Tarenaya hassleriana
Thecc.03G212500 Theobroma cacao
Thhalv10004343m.g Eutrema salsugineum
TPR.G27916 Trifolium pratense
TPR.G35913 Trifolium pratense
TWI13G0007 Tripterygium wilfordii
TWI74G0239 Tripterygium wilfordii
unitig_578.g16670 Utricularia gibba
vmacro10175 Vaccinium macrocarpon
VMungo0647G0797 Vigna mungo
VMungo1309G2872 Vigna mungo
Zm00001eb209800 Zea mays
Zm00001eb229510 Zea mays

User provided reference genes

Program Settings