Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01580 Brassica napus
A03p05700 Brassica napus
Actinidia06328 Actinidia chinensis
Actinidia39388 Actinidia chinensis
Ah.06g193560 Amaranthus hybridus
AL6G23500 Arabidopsis lyrata
Aqoxy3G00443 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CQR7QS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IJ2E5N Arachis hypogaea
AT5G12930 Arabidopsis thaliana
ATR0815G050 Amborella trichopoda
Atru.chr3.2554 Acer truncatum
AUR62000084 Chenopodium quinoa
AUR62005725 Chenopodium quinoa
AUR62014261 Chenopodium quinoa
AUR62019256 Chenopodium quinoa
AUR62043578 Chenopodium quinoa
AUR62043683 Chenopodium quinoa
BcaB01g05389 Brassica carinata
BcaNung01186 Brassica carinata
BcaNung03603 Brassica carinata
BolC2t06525H Brassica oleracea
BolC3t13172H Brassica oleracea
BraA02t05138Z Brassica rapa
BraA03t09909Z Brassica rapa
C02p05800 Brassica napus
C03p06660 Brassica napus
CANSAT54G2219 Cannabis sativa
CARHR200520 Cardamine hirsuta
Carub.0006s1111 Capsella rubella
Ca_01279_v3 Cicer arietinum L.
Cc01_g04400 Coffea canephora
Cfa009719 Carpinus fangiana
Cfa009721 Carpinus fangiana
Ciclev10014934m.g Citrus clementina
CiPaw.14G122300 Carya illinoinensis
ClCG02G023440 Citrullus lanatus
COL.COLO4_24829 Corchorus olitorius
Cpa.g.sc84.90 Carica papaya
CsaV3_4G024070 Cucumis sativus L.
CSS0020882 Camellia sinensis var. sinensis
CSS0048119 Camellia sinensis var. sinensis
DCAR_002046 Daucus carota
Dinv36292 Davidia involucrata
Duzib150G0354 Durio zibethinus
Duzib168G2100 Durio zibethinus
ECA233G1597 Erigeron canadensis
EL10Ac4g10308 Beta vulgaris
Eucgr.B03667 Eucalyptus grandis
FAN11G0272 Fragaria x ananassa
FAN16G1487 Fragaria x ananassa
FAN21G1726 Fragaria x ananassa
FAN25G3739 Fragaria x ananassa
FvH4_3g43290 Fragaria vesca
Glyma.13G341800 Glycine max
Glyma.15G032500 Glycine max
Gohir.A13G216000 Gossypium hirsutum
Gohir.D13G219700 Gossypium hirsutum
GSVIVG01025314001 Vitis vinifera
HanXRQChr13g0403991 Helianthus annuus
Haze_23073 Corylus avellana
Haze_23653 Corylus avellana
Haze_23654 Corylus avellana
Haze_23655 Corylus avellana
Haze_23656 Corylus avellana
Haze_23698 Corylus avellana
Haze_23699 Corylus avellana
Haze_23701 Corylus avellana
HPP92_015767 Vanilla planifolia
Hund07491 Selenicereus undatus
Hund07543 Selenicereus undatus
Lalb_Chr22g0352291 Lupinus albus
Lalb_Chr24g0396971 Lupinus albus
Lj1C361T2 Lonicera japonica
Lj3g0020392 Lotus japonicus
Lsat_1_v5_gn_1_67161 Lactuca sativa
Lsat_1_v5_gn_1_67181 Lactuca sativa
Manes.06G167800 Manihot esculenta
Manes.14G013400 Manihot esculenta
MBI01_g36435_MAGBIO Magnolia biondii
MD11G1028000 Malus domestica
Medtr2g098330 Medicago truncatula
MELO3C003056.2 Cucumis melo
MELO3C014616.2 Cucumis melo
MELO3C032928.2 Cucumis melo
MELO3C034566.2 Cucumis melo
Migut.D00567 Erythranthe guttata
Migut.N02301 Erythranthe guttata
MSTRG.12478 Avicennia marina
MSTRG.17577 Avicennia marina
Nitab4.5_0000175g0040 Nicotiana tabacum
Nitab4.5_0002278g0050 Nicotiana tabacum
Nn2g15509 Nelumbo nucifera
Nn7g36093 Nelumbo nucifera
Oeu014066.1 Olea europaea
Os09g0488600 Oryza sativa ssp. japonica
Peaxi162Scf00839g00234 Petunia axillaris
PGR102G2927 Punica granatum
Phvul.L011043 Phaseolus vulgaris
Potri.001G017100 Populus trichocarpa
Potri.003G207400 Populus trichocarpa
Potri.003G207500 Populus trichocarpa
Prupe.6G022100 Prunus persica
Psat5g288280 Pisum sativum
PSO339G2813 Papaver somniferum
PSO384G3161 Papaver somniferum
QL01p005703 Quercus lobata
RcHm_v2.0_Chr5g0077351 Rosa chinensis
Rhsim01G0190000 Rhododendron simsii
Sabra01G0012000 Salix brachista
Sabra03G0153000 Salix brachista
SalBow4G0075 Salvia bowleyana
SalBow4G2759 Salvia bowleyana
Sc16g0011650 Simmondsia chinensis
Sed0010144 Sechium edule
SGA_v2.0_scaffold247G44833 Striga asiatica
SHI30498 Sapria himalayana
Solyc11g056640.3 Solanum lycopersicum
Sp6g31030 Schrenkiella parvula
TAR623G0385 Trochodendron aralioides
THA.LOC104799094 Tarenaya hassleriana
THA.LOC104804971 Tarenaya hassleriana
Thecc.09G226300 Theobroma cacao
Thhalv10013519m.g Eutrema salsugineum
TPR.G377 Trifolium pratense
TPR.G6898 Trifolium pratense
TWI32G0154 Tripterygium wilfordii
vmacro12713 Vaccinium macrocarpon
VMungo1080G1590 Vigna mungo
Zm00001eb101890 Zea mays

User provided reference genes

Program Settings