Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08500 Brassica napus
A08p19610 Brassica napus
Aa31LG2G20940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis
Actinidia25263 Actinidia chinensis
Actinidia39725 Actinidia chinensis
AL7G22860 Arabidopsis lyrata
Aqoxy7G04066 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7H2MWE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C7GQ4M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RIAB4B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UHY7MZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea
AT4G29540 Arabidopsis thaliana
ATR0705G153 Amborella trichopoda
Atru.chr7.1566 Acer truncatum
AUR62027411 Chenopodium quinoa
AUR62031326 Chenopodium quinoa
BcaB03g12611 Brassica carinata
BcaC01g01176 Brassica carinata
BcaC09g52218 Brassica carinata
BolC1t00940H Brassica oleracea
BolC1t00952H Brassica oleracea
BolC3t21232H Brassica oleracea
BraA01t00799Z Brassica rapa
BraA08t33919Z Brassica rapa
C01p09780 Brassica napus
C01p09890 Brassica napus
C01p09900 Brassica napus
C03p89230 Brassica napus
CAN.G1241.18 Capsicum annuum
CARHR237370 Cardamine hirsuta
Carub.0007s1101 Capsella rubella
Ca_25619_v3 Cicer arietinum L.
CBR_g36936 Chara braunii
Cc06_g11190 Coffea canephora
CDE05G1399 Ceratophyllum demersum
Ciclev10008848m.g Citrus clementina
CiPaw.03G217800 Carya illinoinensis
COL.COLO4_18220 Corchorus olitorius
CsaV3_1G040270 Cucumis sativus L.
CsaV3_UNG066530 Cucumis sativus L.
CsaV3_UNG066540 Cucumis sativus L.
CSS0007101 Camellia sinensis var. sinensis
CSS0015474 Camellia sinensis var. sinensis
DCAR_011988 Daucus carota
Dinv36751 Davidia involucrata
Duzib150G0162 Durio zibethinus
ECA234G0840 Erigeron canadensis
EL10Ac8g19307 Beta vulgaris
Eucgr.C00910 Eucalyptus grandis
FAN19G2130 Fragaria x ananassa
FAN23G1099 Fragaria x ananassa
FAN26G1667 Fragaria x ananassa
FAN28G0362 Fragaria x ananassa
FvH4_1g22100 Fragaria vesca
Glyma.01G003200 Glycine max
Glyma.07G128800 Glycine max
Gohir.A06G071400 Gossypium hirsutum
Gohir.D06G070100 Gossypium hirsutum
Gorai.010G081700 Gossypium raimondii
GSVIVG01015225001 Vitis vinifera
HanXRQChr12g0354751 Helianthus annuus
Haze_25892 Corylus avellana
Hma1.2p1_0800F.1_g219980 Hydrangea macrophylla
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla
Hma1.2p1_0800F.1_g220000 Hydrangea macrophylla
HPP92_023401 Vanilla planifolia
Hund24744 Selenicereus undatus
Lalb_Chr24g0393801 Lupinus albus
Lj2g0022455 Lotus japonicus
Lj7C673T11 Lonicera japonica
Lsat_1_v5_gn_5_145641 Lactuca sativa
Manes.03G032201 Manihot esculenta
Mapoly0014s0071 Marchantia polymorpha
MBI01_g02257_MAGBIO Magnolia biondii
MD02G1076200 Malus domestica
MD13G1273400 Malus domestica
MD15G1204600 Malus domestica
MD17G1181800 Malus domestica
Medtr4g036675 Medicago truncatula
MELO3C015455.2 Cucumis melo
Migut.J00593 Erythranthe guttata
MSTRG.19527 Avicennia marina
Nitab4.5_0000540g0250 Nicotiana tabacum
Nitab4.5_0011903g0020 Nicotiana tabacum
Nn8g38904 Nelumbo nucifera
Oeu021834.2 Olea europaea
Os01g0722100 Oryza sativa ssp. japonica
Peaxi162Scf00498g00128 Petunia axillaris
PGR142G3838 Punica granatum
PGSC0003DMG400000341 Solanum tuberosum
Phvul.004G171500 Phaseolus vulgaris
Potri.006G150200 Populus trichocarpa
Pp3c5_18660 Physcomitrium patens
PRCOL_00006271 Prasinoderma coloniale
Prupe.7G212400 Prunus persica
Psat1g049600 Pisum sativum
PSO210G1139 Papaver somniferum
PSO210G3620 Papaver somniferum
QL02p062983 Quercus lobata
RcHm_v2.0_Chr2g0093061 Rosa chinensis
Sabra06G0118900 Salix brachista
SalBow6G0258 Salvia bowleyana
Sc18g0001930 Simmondsia chinensis
Sed0009633 Sechium edule
Sed0024135 Sechium edule
SEGI_04673 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21594 Striga asiatica
SMO118G0489 Selaginella moellendorffii
Solyc12g008790.3 Solanum lycopersicum
Sopen12g003720 Solanum pennellii
Sp7g27400 Schrenkiella parvula
TAR636G0081 Trochodendron aralioides
THA.LOC104807985 Tarenaya hassleriana
THA.LOC104814611 Tarenaya hassleriana
THA.LOC104827538 Tarenaya hassleriana
THA.LOC109116077 Tarenaya hassleriana
Thecc.09G091900 Theobroma cacao
Thhalv10025613m.g Eutrema salsugineum
TPR.G35498 Trifolium pratense
TWI32G0461 Tripterygium wilfordii
TWI34G0201 Tripterygium wilfordii
unitig_27.g24727 Utricularia gibba
vmacro17221 Vaccinium macrocarpon
VMungo0464G0679 Vigna mungo
Zm00001eb361670 Zea mays

User provided reference genes

Program Settings