Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p02880 Brassica napus
Aa31LG9G8890 Aethionema arabicum
Actinidia26538 Actinidia chinensis
Actinidia39595 Actinidia chinensis
Ah.09g232450 Amaranthus hybridus
AL6G49160 Arabidopsis lyrata
Aqoxy1G01654 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DKT922 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IB7BS1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN2AI9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z0KP5S Arachis hypogaea
AT4G03620 Arabidopsis thaliana
ATR0626G038 Amborella trichopoda
Atru.chr10.1031 Acer truncatum
AUR62002659 Chenopodium quinoa
AUR62030127 Chenopodium quinoa
BcaB01g01909 Brassica carinata
BcaC04g23958 Brassica carinata
BolC9t53223H Brassica oleracea
BraA09t35933Z Brassica rapa
C03p36620 Brassica napus
C09p02960 Brassica napus
CAN.G36.30 Capsicum annuum
CANSAT35G1388 Cannabis sativa
CARHR252040 Cardamine hirsuta
Carub.0006s3344 Capsella rubella
Ca_00520_v3 Cicer arietinum L.
Cc09_g08600 Coffea canephora
Cfa000873 Carpinus fangiana
Ciclev10015995m.g Citrus clementina
CiPaw.09G117700 Carya illinoinensis
ClCG03G006430 Citrullus lanatus
COL.COLO4_17663 Corchorus olitorius
Cpa.g.sc17.66 Carica papaya
CsaV3_1G036960 Cucumis sativus L.
CSS0008742 Camellia sinensis var. sinensis
CSS0019216 Camellia sinensis var. sinensis
CSS0023088 Camellia sinensis var. sinensis
DCAR_003876 Daucus carota
DCAR_007858 Daucus carota
DCAR_027876 Daucus carota
Dinv21492 Davidia involucrata
Duzib052G0461 Durio zibethinus
Duzib132G1046 Durio zibethinus
Duzib248G1648 Durio zibethinus
ECA236G5152 Erigeron canadensis
EL10Ac8g19610 Beta vulgaris
Eucgr.E02463 Eucalyptus grandis
FAN11G1717 Fragaria x ananassa
FAN16G0477 Fragaria x ananassa
FAN21G0577 Fragaria x ananassa
FAN25G1233 Fragaria x ananassa
FvH4_3g09520 Fragaria vesca
Glyma.13G220300 Glycine max
Glyma.15G092100 Glycine max
GSVIVG01021577001 Vitis vinifera
HanXRQChr04g0112111 Helianthus annuus
HanXRQChr15g0481561 Helianthus annuus
Haze_05717 Corylus avellana
Hma1.2p1_0689F.1_g203740 Hydrangea macrophylla
HPP92_019506 Vanilla planifolia
Hund21555 Selenicereus undatus
Lalb_Chr15g0086701 Lupinus albus
Lalb_Chr18g0055221 Lupinus albus
Lalb_Chr20g0117731 Lupinus albus
Lj1A1167T61 Lonicera japonica
Lj2A324T65 Lonicera japonica
Lj6g0008094 Lotus japonicus
Lsat_1_v5_gn_1_116040 Lactuca sativa
Lsat_1_v5_gn_7_32280 Lactuca sativa
Manes.15G125900 Manihot esculenta
Manes.17G075000 Manihot esculenta
MBI02_g11375_MAGBIO Magnolia biondii
MBI18_g10587_MAGBIO Magnolia biondii
MD05G1060100 Malus domestica
MD10G1256000 Malus domestica
Medtr2g018890 Medicago truncatula
MELO3C002779.2 Cucumis melo
Migut.H01344 Erythranthe guttata
Migut.M01870 Erythranthe guttata
MSTRG.13261 Avicennia marina
MSTRG.14783 Avicennia marina
Nitab4.5_0000315g0160 Nicotiana tabacum
Nitab4.5_0000717g0050 Nicotiana tabacum
Nitab4.5_0002900g0020 Nicotiana tabacum
Nitab4.5_0008802g0020 Nicotiana tabacum
Nn1g09396 Nelumbo nucifera
Nn3g20281 Nelumbo nucifera
Nn4g26650 Nelumbo nucifera
Nn8g39854 Nelumbo nucifera
Peaxi162Scf00333g00214 Petunia axillaris
Peaxi162Scf00333g00215 Petunia axillaris
PGR031G1516 Punica granatum
PGSC0003DMG400005380 Solanum tuberosum
PGSC0003DMG400031336 Solanum tuberosum
Phvul.006G167100 Phaseolus vulgaris
Potri.011G091700 Populus trichocarpa
Prupe.4G087600 Prunus persica
Psat1g191320 Pisum sativum
PSO541G2924 Papaver somniferum
PSO541G2932 Papaver somniferum
PSO675G1541 Papaver somniferum
PSO675G3639 Papaver somniferum
QL05p054330 Quercus lobata
RcHm_v2.0_Chr5g0015101 Rosa chinensis
Rhsim02G0159700 Rhododendron simsii
Sabra11G0085900 Salix brachista
SalBow7G1462 Salvia bowleyana
SalBow7G3121 Salvia bowleyana
SalBow8G3821 Salvia bowleyana
Sc05g0005830 Simmondsia chinensis
Sed0007526 Sechium edule
Sed0012497 Sechium edule
SEGI_26103 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30660 Striga asiatica
SGA_v2.0_scaffold51G18644 Striga asiatica
Solyc02g021450.2 Solanum lycopersicum
Solyc08g023270.3 Solanum lycopersicum
Sopen02g005930 Solanum pennellii
Sopen08g008180 Solanum pennellii
Sp6g03610 Schrenkiella parvula
TAR624G0353 Trochodendron aralioides
TAR627G0722 Trochodendron aralioides
THA.LOC104806979 Tarenaya hassleriana
Thecc.02G010100 Theobroma cacao
Thhalv10029201m.g Eutrema salsugineum
TPR.G26249 Trifolium pratense
TWI09G0666 Tripterygium wilfordii
TWI53G0643 Tripterygium wilfordii
unitig_37.g12083 Utricularia gibba
VMungo0540G2189 Vigna mungo

User provided reference genes

Program Settings