Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09280 Brassica napus
A03p58340 Brassica napus
Aa31LG2G21720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis
Actinidia09513 Actinidia chinensis
Actinidia23700 Actinidia chinensis
Ah.15g092630 Amaranthus hybridus
AL7G23880 Arabidopsis lyrata
Aqoxy5G00130 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea
AT4G28660 Arabidopsis thaliana
ATR0787G157 Amborella trichopoda
Atru.chr5.1865 Acer truncatum
AUR62008802 Chenopodium quinoa
AUR62025437 Chenopodium quinoa
BcaB03g14333 Brassica carinata
BcaC06g32609 Brassica carinata
BcaNung04295 Brassica carinata
BcaNung04696 Brassica carinata
BolC7t46115H Brassica oleracea
BraA01t00872Z Brassica rapa
C01p10860 Brassica napus
C07p56360 Brassica napus
CAN.G536.12 Capsicum annuum
CANSAT01G0515 Cannabis sativa
CANSAT01G2333 Cannabis sativa
CARHR236440 Cardamine hirsuta
Carub.0007s1200 Capsella rubella
Ca_09646_v3 Cicer arietinum L.
CBR_g12742 Chara braunii
Cc01_g17770 Coffea canephora
CDE02G4364 Ceratophyllum demersum
CDE09G0356 Ceratophyllum demersum
Cfa002488 Carpinus fangiana
Ciclev10022322m.g Citrus clementina
CiPaw.03G271300 Carya illinoinensis
ClCG06G001400 Citrullus lanatus
COL.COLO4_10205 Corchorus olitorius
Cpa.g.sc87.33 Carica papaya
Cre10.g440450 Chlamydomonas reinhardtii
CSS0010160 Camellia sinensis var. sinensis
CSS0012566 Camellia sinensis var. sinensis
CSS0017427 Camellia sinensis var. sinensis
DCAR_000568 Daucus carota
Dinv43066 Davidia involucrata
Duzib138G0534 Durio zibethinus
Duzib211G0648 Durio zibethinus
ECA248G3782 Erigeron canadensis
EL10Ac7g17691 Beta vulgaris
Eucgr.K01424 Eucalyptus grandis
FAN15G2830 Fragaria x ananassa
FAN24G3422 Fragaria x ananassa
FAN27G2528 Fragaria x ananassa
FvH4_2g20470 Fragaria vesca
Glyma.10G040600 Glycine max
Glyma.13G127200 Glycine max
Gohir.A07G152700 Gossypium hirsutum
Gohir.D07G158900 Gossypium hirsutum
Gorai.001G182100 Gossypium raimondii
GSVIVG01028434001 Vitis vinifera
HanXRQChr01g0014971 Helianthus annuus
Haze_24710 Corylus avellana
HPP92_008468 Vanilla planifolia
HPP92_027289 Vanilla planifolia
Hund18287 Selenicereus undatus
Lalb_Chr02g0152741 Lupinus albus
Lalb_Chr06g0170731 Lupinus albus
Lj1C74G4 Lonicera japonica
Lj5g0017558 Lotus japonicus
Lsat_1_v5_gn_5_181161 Lactuca sativa
Manes.12G038000 Manihot esculenta
Manes.13G039500 Manihot esculenta
Mapoly0042s0085 Marchantia polymorpha
MBI07_g08912_MAGBIO Magnolia biondii
MCO16G336 Micromonas commoda
MD05G1188500 Malus domestica
MD10G1176000 Malus domestica
Medtr1g069465 Medicago truncatula
MELO3C022393.2 Cucumis melo
Migut.D00479 Erythranthe guttata
Nitab4.5_0000845g0140 Nicotiana tabacum
Nitab4.5_0002435g0010 Nicotiana tabacum
Nn3g19801 Nelumbo nucifera
Oeu015437.1 Olea europaea
Oeu052083.1 Olea europaea
Os01g0938100 Oryza sativa ssp. japonica
Peaxi162Scf00043g00255 Petunia axillaris
PGR044G2038 Punica granatum
PGSC0003DMG400008585 Solanum tuberosum
Phvul.001G165200 Phaseolus vulgaris
Phvul.007G153500 Phaseolus vulgaris
Potri.002G256400 Populus trichocarpa
Pp3c11_18280 Physcomitrium patens
Pp3c7_5450 Physcomitrium patens
PRCOL_00005949 Prasinoderma coloniale
Prupe.8G215000 Prunus persica
Psat6g062520 Pisum sativum
PSO764G0320 Papaver somniferum
PSO832G0858 Papaver somniferum
QL09p041558 Quercus lobata
RcHm_v2.0_Chr6g0286561 Rosa chinensis
Rhsim01G0260300 Rhododendron simsii
Sabra02G0194900 Salix brachista
SalBow4G0311 Salvia bowleyana
Sc05g0002880 Simmondsia chinensis
Sed0007731 Sechium edule
SGA_v2.0_scaffold1G00660 Striga asiatica
SMO347G0509 Selaginella moellendorffii
Solyc09g064500.3 Solanum lycopersicum
Sopen09g025650 Solanum pennellii
Sp7g26630 Schrenkiella parvula
TAR362G0025 Trochodendron aralioides
TAR362G0914 Trochodendron aralioides
TAR633G0397 Trochodendron aralioides
THA.LOC104814531 Tarenaya hassleriana
THA.LOC104820068 Tarenaya hassleriana
Thecc.01G249800 Theobroma cacao
Thhalv10026347m.g Eutrema salsugineum
TPR.G5919 Trifolium pratense
TWI18G0031 Tripterygium wilfordii
unitig_22.g6304 Utricularia gibba
unitig_8.g3074 Utricularia gibba
vmacro14793 Vaccinium macrocarpon
VMungo0720G1620 Vigna mungo
VMungo1383G1953 Vigna mungo
Zm00001eb141750 Zea mays
Zm00001eb141760 Zea mays
Zm00001eb141790 Zea mays
Zm00001eb141830 Zea mays
Zm00001eb141870 Zea mays

User provided reference genes

Program Settings