Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p43550 Brassica napus
A09p23910 Brassica napus
A09p23920 Brassica napus
Aa31LG2G7560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis
Actinidia31175 Actinidia chinensis
Ah.03g132040 Amaranthus hybridus
AL5G11790 Arabidopsis lyrata
AL5G11850 Arabidopsis lyrata
Aqoxy3G00786 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea
AT2G02515 Arabidopsis thaliana
AT2G02590 Arabidopsis thaliana
ATR0665G167 Amborella trichopoda
Atru.chr11.1861 Acer truncatum
AUR62026262 Chenopodium quinoa
AUR62026454 Chenopodium quinoa
BcaB07g30697 Brassica carinata
BcaB07g30698 Brassica carinata
BcaC04g21520 Brassica carinata
BcaC04g21521 Brassica carinata
BcaC06g31223 Brassica carinata
BcaC06g34048 Brassica carinata
BolC7t43841H Brassica oleracea
BolC9t55941H Brassica oleracea
BraA06t27240Z Brassica rapa
BraA09t37995Z Brassica rapa
BraA09t37996Z Brassica rapa
C07p33300 Brassica napus
C09p30780 Brassica napus
CAN.G27.7 Capsicum annuum
CANSAT78G1034 Cannabis sativa
CARHR145050 Cardamine hirsuta
CARHR145110 Cardamine hirsuta
Carub.0005s0158 Capsella rubella
Ca_04692_v3 Cicer arietinum L.
CBR_g39595 Chara braunii
Cc11_g13550 Coffea canephora
CDE06G2488 Ceratophyllum demersum
CDE07G0470 Ceratophyllum demersum
Cfa009042 Carpinus fangiana
Ciclev10032129m.g Citrus clementina
CiPaw.05G140400 Carya illinoinensis
ClCG05G024630 Citrullus lanatus
COL.COLO4_36182 Corchorus olitorius
Cpa.g.sc73.14 Carica papaya
Cpa.g.sc83.31 Carica papaya
CsaV3_5G032300 Cucumis sativus L.
CSS0050443 Camellia sinensis var. sinensis
DCAR_001229 Daucus carota
DCAR_024490 Daucus carota
Dinv34195 Davidia involucrata
Duzib268G1145 Durio zibethinus
ECA246G2177 Erigeron canadensis
EL10Ac6g13142 Beta vulgaris
Eucgr.B02589 Eucalyptus grandis
FAN07G0827 Fragaria x ananassa
FAN12G1990 Fragaria x ananassa
FAN22G0508 Fragaria x ananassa
FvH4_4g32070 Fragaria vesca
Glyma.01G040500 Glycine max
Glyma.02G024100 Glycine max
Gohir.A05G321100 Gossypium hirsutum
Gohir.D05G323300 Gossypium hirsutum
Gorai.009G347000 Gossypium raimondii
GSVIVG01020079001 Vitis vinifera
HanXRQChr15g0478181 Helianthus annuus
HanXRQChr17g0544581 Helianthus annuus
Haze_12072 Corylus avellana
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla
HPP92_018837 Vanilla planifolia
Hund25274 Selenicereus undatus
Lalb_Chr05g0217521 Lupinus albus
Lj2g0002167 Lotus japonicus
Lj6A795T74 Lonicera japonica
Lsat_1_v5_gn_3_49700 Lactuca sativa
Manes.05G096000 Manihot esculenta
Mapoly0001s0092 Marchantia polymorpha
MBI04_g22196_MAGBIO Magnolia biondii
MD13G1079600 Malus domestica
MD16G1079500 Malus domestica
Medtr5g037600 Medicago truncatula
MELO3C012062.2 Cucumis melo
Migut.E00118 Erythranthe guttata
Migut.L01348 Erythranthe guttata
MSTRG.7831 Avicennia marina
Nitab4.5_0000679g0100 Nicotiana tabacum
Nitab4.5_0002969g0040 Nicotiana tabacum
Nn4g23031 Nelumbo nucifera
Oeu044566.1 Olea europaea
Os03g0800500 Oryza sativa ssp. japonica
Peaxi162Scf00209g00517 Petunia axillaris
PGR119G0173 Punica granatum
PGSC0003DMG400017619 Solanum tuberosum
Phvul.002G080900 Phaseolus vulgaris
Potri.010G034400 Populus trichocarpa
Pp3c22_2360 Physcomitrium patens
Prupe.1G267200 Prunus persica
Psat2g115440 Pisum sativum
PSO478G1322 Papaver somniferum
QL03p065944 Quercus lobata
RcHm_v2.0_Chr4g0440761 Rosa chinensis
Rhsim12G0129700 Rhododendron simsii
Sabra10G0030400 Salix brachista
SalBow2G1916 Salvia bowleyana
SalBow8G3437 Salvia bowleyana
Sc11g0001660 Simmondsia chinensis
Sed0022227 Sechium edule
SEGI_16485 Sequoiadendron giganteum
SEGI_34054 Sequoiadendron giganteum
SGA_v2.0_scaffold87G26972 Striga asiatica
SMO147G0037 Selaginella moellendorffii
Solyc05g006965.1 Solanum lycopersicum
Sopen05g002930 Solanum pennellii
Sp2g13720 Schrenkiella parvula
Sp2g13740 Schrenkiella parvula
Sp2g13810 Schrenkiella parvula
TAR481G0011 Trochodendron aralioides
Thecc.02G232800 Theobroma cacao
Thhalv10004613m.g Eutrema salsugineum
Thhalv10005343m.g Eutrema salsugineum
Thhalv10005501m.g Eutrema salsugineum
TPR.G26717 Trifolium pratense
TWI18G0579 Tripterygium wilfordii
unitig_62.g23684 Utricularia gibba
vmacro16324 Vaccinium macrocarpon
VMungo1215G1908 Vigna mungo
Zm00001eb151370 Zea mays
Zm00001eb212770 Zea mays

User provided reference genes

Program Settings