Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27990 Brassica napus
Aa31LG8G7600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis
Actinidia16298 Actinidia chinensis
AL3G34710 Arabidopsis lyrata
Aqoxy1G00184 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea
AT3G20790 Arabidopsis thaliana
ATR0605G294 Amborella trichopoda
Atru.chr3.2505 Acer truncatum
AUR62000078 Chenopodium quinoa
AUR62019251 Chenopodium quinoa
BcaB06g26149 Brassica carinata
BcaC05g28281 Brassica carinata
BcaC09g49021 Brassica carinata
BolC1t04302H Brassica oleracea
BolC5t33061H Brassica oleracea
BraA05t21682Z Brassica rapa
C01p43430 Brassica napus
C05p43290 Brassica napus
CAN.G388.68 Capsicum annuum
CANSAT54G0336 Cannabis sativa
CARHR096620 Cardamine hirsuta
Carub.0003s2075 Capsella rubella
Ca_01271_v3 Cicer arietinum L.
Cc01_g04140 Coffea canephora
Cfa009695 Carpinus fangiana
Cfa023900 Carpinus fangiana
Ciclev10015756m.g Citrus clementina
CiPaw.13G165500 Carya illinoinensis
ClCG02G023630 Citrullus lanatus
COL.COLO4_09894 Corchorus olitorius
Cpa.g.sc84.110 Carica papaya
Cre01.g023300 Chlamydomonas reinhardtii
CsaV3_4G023790 Cucumis sativus L.
CSS0019947 Camellia sinensis var. sinensis
CSS0042824 Camellia sinensis var. sinensis
CSS0043067 Camellia sinensis var. sinensis
CSS0045029 Camellia sinensis var. sinensis
CSS0049558 Camellia sinensis var. sinensis
DCAR_002037 Daucus carota
Dinv36303 Davidia involucrata
Duzib168G0763 Durio zibethinus
ECA233G0904 Erigeron canadensis
ECA233G1997 Erigeron canadensis
EL10Ac4g10317 Beta vulgaris
Eucgr.J00813 Eucalyptus grandis
FAN11G0987 Fragaria x ananassa
FAN11G3540 Fragaria x ananassa
FAN16G2307 Fragaria x ananassa
FAN25G0441 Fragaria x ananassa
FvH4_3g43551 Fragaria vesca
Glyma.13G342800 Glycine max
Glyma.15G031500 Glycine max
Gohir.A06G108500 Gossypium hirsutum
Gohir.D06G112300 Gossypium hirsutum
Gorai.010G128200 Gossypium raimondii
GSVIVG01025335001 Vitis vinifera
HanXRQChr02g0056471 Helianthus annuus
Haze_23046 Corylus avellana
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla
HPP92_000457 Vanilla planifolia
Hund22080 Selenicereus undatus
Lalb_Chr24g0396941 Lupinus albus
Lj1A365G18 Lonicera japonica
Lj3g0007180 Lotus japonicus
Lj4g0026168 Lotus japonicus
Lju1319A3G40 Lonicera japonica
Lsat_1_v5_gn_6_50101 Lactuca sativa
Manes.14G014400 Manihot esculenta
Mapoly0033s0066 Marchantia polymorpha
Mapoly0150s0011 Marchantia polymorpha
MBI04_g27131_MAGBIO Magnolia biondii
MD11G1022800 Malus domestica
Medtr2g098500 Medicago truncatula
Medtr8g016390 Medicago truncatula
MELO3C014640.2 Cucumis melo
Migut.D00559 Erythranthe guttata
Migut.N02293 Erythranthe guttata
MSTRG.12483 Avicennia marina
MSTRG.21409 Avicennia marina
Nitab4.5_0003796g0050 Nicotiana tabacum
Nitab4.5_0008137g0040 Nicotiana tabacum
Nn7g36060 Nelumbo nucifera
Oeu037561.1 Olea europaea
Oeu042179.3 Olea europaea
Os09g0280300 Oryza sativa ssp. japonica
Peaxi162Scf00559g00415 Petunia axillaris
PGR119G1295 Punica granatum
Phvul.005G150400 Phaseolus vulgaris
Potri.003G210900 Populus trichocarpa
Potri.T085501 Populus trichocarpa
Pp3c16_13070 Physcomitrium patens
Pp3c3_20310 Physcomitrium patens
Pp3c6_24290 Physcomitrium patens
Prupe.6G018500 Prunus persica
Psat0s4363g0040 Pisum sativum
Psat5g288640 Pisum sativum
Psat5g288680 Pisum sativum
Psat6g204000 Pisum sativum
Psat7g086040 Pisum sativum
PSO339G6331 Papaver somniferum
QL01p006224 Quercus lobata
RcHm_v2.0_Chr5g0078111 Rosa chinensis
Rhsim13G0225300 Rhododendron simsii
Rhsim13G0225400 Rhododendron simsii
Sc06g0004470 Simmondsia chinensis
Sc06g0004480 Simmondsia chinensis
Sed0023125 Sechium edule
SEGI_39854 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00800 Striga asiatica
SMO116G0160 Selaginella moellendorffii
SMO144G0113 Selaginella moellendorffii
SMO146G0097 Selaginella moellendorffii
Solyc01g006630.3 Solanum lycopersicum
Sopen01g002620 Solanum pennellii
Sp3g18810 Schrenkiella parvula
TAR636G0774 Trochodendron aralioides
TAR636G1381 Trochodendron aralioides
THA.LOC104816910 Tarenaya hassleriana
Thecc.09G223300 Theobroma cacao
Thhalv10021019m.g Eutrema salsugineum
TPR.G18832 Trifolium pratense
TWI60G1552 Tripterygium wilfordii
unitig_8.g3081 Utricularia gibba
vmacro04169 Vaccinium macrocarpon
VMungo0251G0909 Vigna mungo
VMungo1080G1390 Vigna mungo
Zm00001eb094580 Zea mays

User provided reference genes

Program Settings