Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11390 Brassica napus
A10p10460 Brassica napus
Aa31LG3G9490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis
Actinidia09185 Actinidia chinensis
Actinidia14795 Actinidia chinensis
Ah.07g200580 Amaranthus hybridus
AL4G21070 Arabidopsis lyrata
AL8G27520 Arabidopsis lyrata
AL8G27580 Arabidopsis lyrata
Aqoxy4G02643 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea
AT5G52980 Arabidopsis thaliana
ATR0665G562 Amborella trichopoda
Atru.chr6.1650 Acer truncatum
AUR62007305 Chenopodium quinoa
AUR62018698 Chenopodium quinoa
BcaB05g21996 Brassica carinata
BcaC03g14468 Brassica carinata
BcaNung06895 Brassica carinata
BolC2t08031H Brassica oleracea
BolC9t57145H Brassica oleracea
BraA02t06203Z Brassica rapa
BraA10t43129Z Brassica rapa
C02p18900 Brassica napus
C09p42690 Brassica napus
CAN.G298.27 Capsicum annuum
CANSAT21G1027 Cannabis sativa
CARHR265970 Cardamine hirsuta
Carub.0008s1318 Capsella rubella
Ca_10583_v3 Cicer arietinum L.
CBR_g88177 Chara braunii
Cc08_g03000 Coffea canephora
CDE06G2650 Ceratophyllum demersum
Cfa012466 Carpinus fangiana
Ciclev10022247m.g Citrus clementina
CiPaw.12G065700 Carya illinoinensis
ClCG06G003760 Citrullus lanatus
COL.COLO4_16998 Corchorus olitorius
Cpa.g.c32853 Carica papaya
Cre10.g438750 Chlamydomonas reinhardtii
CsaV3_6G000520 Cucumis sativus L.
CSS0050040 Camellia sinensis var. sinensis
DCAR_004289 Daucus carota
Dinv25231 Davidia involucrata
Dinv28972 Davidia involucrata
Duzib068G1405 Durio zibethinus
ECA240G0359 Erigeron canadensis
EL10Ac5g12082 Beta vulgaris
Eucgr.D02210 Eucalyptus grandis
FAN04G1629 Fragaria x ananassa
FAN08G2226 Fragaria x ananassa
FAN13G0319 Fragaria x ananassa
FAN18G1032 Fragaria x ananassa
FAN18G1789 Fragaria x ananassa
FAN18G2414 Fragaria x ananassa
FvH4_5g22440 Fragaria vesca
Glyma.10G212800 Glycine max
Glyma.20G178200 Glycine max
Gohir.A06G181300 Gossypium hirsutum
Gohir.A08G155600 Gossypium hirsutum
Gohir.D06G188100 Gossypium hirsutum
Gohir.D08G176200 Gossypium hirsutum
Gorai.004G184000 Gossypium raimondii
Gorai.010G220500 Gossypium raimondii
GSVIVG01013134001 Vitis vinifera
HanXRQChr13g0414191 Helianthus annuus
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla
HPP92_020908 Vanilla planifolia
Hund11133 Selenicereus undatus
Lalb_Chr17g0341511 Lupinus albus
Lj2A236G57 Lonicera japonica
Lj5g0000896 Lotus japonicus
Lsat_1_v5_gn_6_80341 Lactuca sativa
Manes.02G087300 Manihot esculenta
Mapoly0102s0011 Marchantia polymorpha
MBI04_g41609_MAGBIO Magnolia biondii
MD06G1036800 Malus domestica
MD16G1272600 Malus domestica
Medtr1g095620 Medicago truncatula
MELO3C021213.2 Cucumis melo
Migut.F00744 Erythranthe guttata
MSTRG.15799 Avicennia marina
Nitab4.5_0002808g0010 Nicotiana tabacum
Nitab4.5_0004555g0010 Nicotiana tabacum
Nn5g27684 Nelumbo nucifera
Oeu006244.1 Olea europaea
Os02g0225300 Oryza sativa ssp. japonica
Peaxi162Scf00184g00013 Petunia axillaris
PGR031G2123 Punica granatum
PGSC0003DMG400017522 Solanum tuberosum
PGSC0003DMG400027709 Solanum tuberosum
Phvul.007G092700 Phaseolus vulgaris
Potri.003G093800 Populus trichocarpa
Pp3c18_16040 Physcomitrium patens
Prupe.5G032500 Prunus persica
Psat6g182880 Pisum sativum
PSO063G6826 Papaver somniferum
PSO541G2859 Papaver somniferum
PSO675G2981 Papaver somniferum
PSO782G2387 Papaver somniferum
RcHm_v2.0_Chr7g0210201 Rosa chinensis
RcHm_v2.0_Chr7g0210231 Rosa chinensis
Rhsim07G0128700 Rhododendron simsii
Sc01g0007360 Simmondsia chinensis
Sed0006289 Sechium edule
SEGI_27853 Sequoiadendron giganteum
SEGI_36898 Sequoiadendron giganteum
SGA_v2.0_scaffold196G40921 Striga asiatica
SGA_v2.0_scaffold6G03147 Striga asiatica
SMO143G0066 Selaginella moellendorffii
Solyc08g076740.4 Solanum lycopersicum
Solyc08g076770.4 Solanum lycopersicum
Solyc10g074822.1 Solanum lycopersicum
Sopen08g025290 Solanum pennellii
Sopen10g027320 Solanum pennellii
Sp6g15140 Schrenkiella parvula
TAR375G0242 Trochodendron aralioides
THA.LOC104806716 Tarenaya hassleriana
Thecc.08G177100 Theobroma cacao
Thhalv10014686m.g Eutrema salsugineum
TPR.G1759 Trifolium pratense
TWI81G0073 Tripterygium wilfordii
unitig_21.g20896 Utricularia gibba
vmacro14181 Vaccinium macrocarpon
Zm00001eb024850 Zea mays

User provided reference genes

Program Settings